Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693025.2_20201
7-02-04] 1,276 sequences; 99,166,722 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq1073 86.0 6e-12
>seq1073
Length=8604
Score = 86.0 bits (94), Expect = 6e-12
Identities = 118/163 (72%), Gaps = 4/163 (2%)
Strand=Plus/Minus
Query 110728 GTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTTTAAGAAAGAATCGTTC 110787
||| || || |||| | ||||||||| |||||||| | ||| | ||||| ||
Sbjct 2355 GTTGACAATACCGTCCGAGGCAGCGAAGAAGGCGAGGATGTGAGAGATGAAGAACTTCTC 2296
Query 110788 CTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACATGTCGATCTCTTCGAC 110847
| |||||| | || || |||||||| | || ||||||||||| ||| ||||| ||| |
Sbjct 2295 GTCGTCGTTAATCTTGTTATTCCAGTCGTGAAGGTCCTTGGACAAGTCAATCTCCTCGGC 2236
Query 110848 CTTCCAG--TGACAATCGACCGCCTTCTTGTACGATTGCCAAA 110888
||||| |||| | | |||||||||||| ||||||||
Sbjct 2235 GGTCCAGAATGACG--CCTCGGCCTTCTTGTACATTTGCCAAA 2195
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445087300744320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |