Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693025.2_20201 7-02-04] 1,276 sequences; 99,166,722 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq1073 86.0 6e-12 >seq1073 Length=8604 Score = 86.0 bits (94), Expect = 6e-12 Identities = 118/163 (72%), Gaps = 4/163 (2%) Strand=Plus/Minus Query 110728 GTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTTTAAGAAAGAATCGTTC 110787 ||| || || |||| | ||||||||| |||||||| | ||| | ||||| || Sbjct 2355 GTTGACAATACCGTCCGAGGCAGCGAAGAAGGCGAGGATGTGAGAGATGAAGAACTTCTC 2296 Query 110788 CTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACATGTCGATCTCTTCGAC 110847 | |||||| | || || |||||||| | || ||||||||||| ||| ||||| ||| | Sbjct 2295 GTCGTCGTTAATCTTGTTATTCCAGTCGTGAAGGTCCTTGGACAAGTCAATCTCCTCGGC 2236 Query 110848 CTTCCAG--TGACAATCGACCGCCTTCTTGTACGATTGCCAAA 110888 ||||| |||| | | |||||||||||| |||||||| Sbjct 2235 GGTCCAGAATGACG--CCTCGGCCTTCTTGTACATTTGCCAAA 2195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445087300744320