Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693025.2_20201
7-02-04] 1,276 sequences; 99,166,722 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1073 93.3 3e-14
>seq1073
Length=8604
Score = 93.3 bits (102), Expect = 3e-14
Identities = 148/210 (70%), Gaps = 3/210 (1%)
Strand=Plus/Plus
Query 44078 AAAGCAGACTGGGCCCTTAAATGGATAAA--TTCA-AATGATTCTTTTGGAGAACGACTT 44134
|| || ||||||||||| || ||||| || || || |||| | | || |||
Sbjct 2601 AAGGCCGACTGGGCCCTCAAGTGGATCAACGACCAGAAGTCCACTTTCGCTCAGCGTCTT 2660
Query 44135 GTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGG 44194
||||| || || | ||| || ||||| ||||| || || | |||||| |||| ||||||
Sbjct 2661 GTCGCCTTCGCTGCTGTTGAGGGCATCTTCTTCTCCGGTGCCTTTGCGTCCATCTTTTGG 2720
Query 44195 TTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGAT 44254
| ||||| || ||| | |||||||| |||| || || ||||| | || ||| ||
Sbjct 2721 CTCAAGAAGCGTGGTCTCATGCCTGGCCTGACCTTCTCCAATGAACTCATCTCTCGCGAC 2780
Query 44255 GAAGGCTTACATTGCGATTTTGCTTGCTTG 44284
||||| | || ||||||||| ||| ||
Sbjct 2781 GAAGGACTGCACACCGATTTTGCCTGCCTG 2810
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397449819062380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |