Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20lindemuthianum_20[genbank_20GCA_5F001693025.2_20201
7-02-04] 1,276 sequences; 99,166,722 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq164 87.8 6e-12
>seq164
Length=162670
Score = 87.8 bits (96), Expect = 6e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040
|| ||| | ||||| ||||||||| |||||||| ||||| ||||| || ||| ||
Sbjct 45209 CCTATGCTGCGTGTCTTCAACAACACCGCTCGCTATGTCGACCAAGGCGGTAACAAGCGA 45268
Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081
|| || || ||| |||||||||| ||||| |||||||||||
Sbjct 45269 CCTGGTGCCTTCGCCATCTACCTTGAGCCCTGGCACGCCGA 45309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588310032691820
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |