Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016
-10-21] 321 sequences; 48,556,462 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq190 154 2e-32
>seq190
Length=394142
Score = 154 bits (170), Expect = 2e-32
Identities = 356/544 (65%), Gaps = 53/544 (10%)
Strand=Plus/Plus
Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730
|||||| | ||| || | || ||||||| ||||||||| ||||| |||| ||||||
Sbjct 350907 CAGCTGCACCTTGAGCGCGTCTACGTGGTCCGCGTAGACGTGTGCGTCGCCCATGACGTG 350966
Query 145731 GATGAAG-TCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGT 145789
| | | | |||||| ||||| | | | | |||| ||||| ||||| || | ||
Sbjct 350967 CGTCAGGCTTCCCGGGA-CGAGGTCGCAGGCGCGCGCGATCATGTGCGTCAGGAGCGCGT 351025
Query 145790 AGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGC 145849
||||||| |||||||| ||||| || || |||||||| | || |||||||| | ||||
Sbjct 351026 AGCTGGCAATGTTGAAAGGCACGCCGAGTCCCATGTCGCAGGACCGCTGGTATATTTGGC 351085
Query 145850 AGGAGAGCTCCCC--------------------------GCCCGCC-------------- 145869
|| || | ||| || ||||
Sbjct 351086 AGTGTAGGTGCCCCTTTGGCTTCTGCTCCTCGTTTGCGGGCGCGCCGCGGGCTCGCGGGT 351145
Query 145870 -----ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCG 145924
||||||||||| | | ||||||||||| |||||||| ||||| |
Sbjct 351146 AAGAGACGTAGAACTGTGCGAACATATGGCAGGGCGGGAGGGCCATCTTCTTTAGGTCTG 351205
Query 145925 CCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG---GGGTTCCTCTTGATCTCCC 145981
|||||||||| ||| |||||| || | | || ||| |||||| |||||| ||
Sbjct 351206 CCGGGTTCCACGCGCTGAGGATGA---TGCGGCGGTCGTATGGGTTCGTCTTGAGCTTGT 351262
Query 145982 CTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGT 146041
|| | || || ||||| ||||| || || ||| | ||||||||||||||||
Sbjct 351263 GGATAACCTCGGCCAGTTGGTCGACGCCTTGGCCAGTATAAACCGTCTTGGAGTCCACGT 351322
Query 146042 ACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCC 146101
|| |||| || ||||| | ||| ||||| || || ||||| || || || ||| || |
Sbjct 351323 ACTCGGCGCCAAAGTGGCGCCATTGGAAGCCATATACGGGGCCGAGATCACCGACTTCAC 351382
Query 146102 TGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGA 146161
||| || || | | | ||||||| || || || || || |||||||||||||||
Sbjct 351383 GGTGGGAAAGGCCAACGCTGTCGAGGAATTCGCGCGATCCATTACCGTCCCAGATCTTGA 351442
Query 146162 CGCC 146165
||||
Sbjct 351443 CGCC 351446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590074432316840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |