Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016 -10-21] 321 sequences; 48,556,462 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq6 89.7 4e-13 >seq6 Length=179136 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||| || || || || || |||||||||||||| | | | ||||||| ||||| Sbjct 31044 TGAAGCGTAGATTCCTTCTGAATGTTGTAATCGCTCAAGGTGCGGCCGTCTTCCAATTGC 30985 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 ||||||||| | || | ||| || ||||| ||| || || || ||||| ||| ||| Sbjct 30984 TTGCCAGCGAAAATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTGAATCTTG 30925 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 ||| || | || || || ||| | || || ||||| || || || || || ||| Sbjct 30924 GACTTCACGTTGTCAATCGTGTCGGAAGACTCGACTTCTAACGTGATTGTCTTTCCGGTC 30865 Query 15341 AGAGTTTTTACAAAAATTTGCATA 15364 | || || || || || |||||| Sbjct 30864 AATGTCTTGACGAAGATCTGCATA 30841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362177783087061