Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016
-10-21] 321 sequences; 48,556,462 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq113 86.0 6e-12
>seq113
Length=441198
Score = 86.0 bits (94), Expect = 6e-12
Identities = 124/175 (71%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 5315 ATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTT 5374
||||| ||| || ||||| || || | ||| |||| ||||||||||||| |||
Sbjct 310641 ATGCGCTCGATGATAAGCTGGGCGATGCGGTCGCCCTCGGCAACCTCAAAGTCGGTGTCG 310700
Query 5375 CCGAAGTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCG 5434
|| ||| || |||| ||| ||| | ||| |||||||| | || || ||||| |||
Sbjct 310701 GCGTGGTTGAAGAGCAGGACCTTGACCTGGCCGCGGTAGTCGGCATCAATGACGCCGGCG 310760
Query 5435 CCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGT 5489
|| |||||| |||| ||| || |||||||| || || || | ||| ||||
Sbjct 310761 CCGGTGTCGATGAAGTTCTTGGAGGCGAGGCCGGAGCGGGGGGCGACGCGGCCGT 310815
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447748603401520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |