Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016 -10-21] 321 sequences; 48,556,462 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq113 86.0 6e-12 >seq113 Length=441198 Score = 86.0 bits (94), Expect = 6e-12 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 5315 ATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTT 5374 ||||| ||| || ||||| || || | ||| |||| ||||||||||||| ||| Sbjct 310641 ATGCGCTCGATGATAAGCTGGGCGATGCGGTCGCCCTCGGCAACCTCAAAGTCGGTGTCG 310700 Query 5375 CCGAAGTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCG 5434 || ||| || |||| ||| ||| | ||| |||||||| | || || ||||| ||| Sbjct 310701 GCGTGGTTGAAGAGCAGGACCTTGACCTGGCCGCGGTAGTCGGCATCAATGACGCCGGCG 310760 Query 5435 CCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGT 5489 || |||||| |||| ||| || |||||||| || || || | ||| |||| Sbjct 310761 CCGGTGTCGATGAAGTTCTTGGAGGCGAGGCCGGAGCGGGGGGCGACGCGGCCGT 310815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447748603401520