Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016
-10-21] 321 sequences; 48,556,462 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq319 96.9 5e-16
seq60 95.1 2e-15
>seq319
Length=190620
Score = 96.9 bits (106), Expect = 5e-16
Identities = 84/102 (82%), Gaps = 2/102 (2%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| |||||||| |||| ||| | | || || ||||| || || ||||| ||||| || |
Sbjct 72367 CGCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATTCAGGGTATCACTAAGCCCGCCA 72309
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
|||||||||| |||||||||||||| ||||||||| | ||||
Sbjct 72308 TCCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 72267
>seq60
Length=104215
Score = 95.1 bits (104), Expect = 2e-15
Identities = 83/101 (82%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || |||| ||| | | || || ||||| || || ||||||||||| || ||
Sbjct 35611 GCCAAGCGCCACCGCAAGATTT-TGCGTGACAACATTCAGGGTATCACCAAGCCTGCGAT 35553
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||||||||| |||||||||||||| ||||||||| | ||||
Sbjct 35552 CCGTCGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 35512
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074906507453
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |