Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016 -10-21] 321 sequences; 48,556,462 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq319 96.9 5e-16 seq60 95.1 2e-15 >seq319 Length=190620 Score = 96.9 bits (106), Expect = 5e-16 Identities = 84/102 (82%), Gaps = 2/102 (2%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||| | | || || ||||| || || ||||| ||||| || | Sbjct 72367 CGCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATTCAGGGTATCACTAAGCCCGCCA 72309 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 |||||||||| |||||||||||||| ||||||||| | |||| Sbjct 72308 TCCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 72267 >seq60 Length=104215 Score = 95.1 bits (104), Expect = 2e-15 Identities = 83/101 (82%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| ||| | | || || ||||| || || ||||||||||| || || Sbjct 35611 GCCAAGCGCCACCGCAAGATTT-TGCGTGACAACATTCAGGGTATCACCAAGCCTGCGAT 35553 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||||||||| |||||||||||||| ||||||||| | |||| Sbjct 35552 CCGTCGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 35512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074906507453