Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016 -10-21] 321 sequences; 48,556,462 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq49 93.3 4e-14 >seq49 Length=112291 Score = 93.3 bits (102), Expect = 4e-14 Identities = 211/313 (67%), Gaps = 11/313 (4%) Strand=Plus/Plus Query 148238 CTTGCCTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTT 148297 |||||| || |||||| || ||||| | | ||||||| || | ||| ||||| || Sbjct 50716 CTTGCCCTCCCGCTCGTACTTCTCGTACAAGGCCTCGAACTCCTCGCCGTAGCAGTCAGC 50775 Query 148298 TAAACCGGGACACTCGTCGGGGCACATCAATGACCATTTCCC-TCCTGTCTTTACCCTCT 148356 | |||||| ||||| | ||| ||||| | | ||| | | | || ||| || |||| Sbjct 50776 CAGACCGGGGCACTCATTGGGACACATGAGGGTCCAGTCAGCGTTCT-TCTCGACTCTCT 50834 Query 148357 TCATAAACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCTCGG 148416 |||| || ||||| || |||| | ||||| | ||| |||||||| | ||||| Sbjct 50835 TCATGAATAGATCGGGGATCCAGAGGGCAAGGAAAAGGTCGCGAGCACGGACCTCCTCCT 50894 Query 148417 CACCCA---TATTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTCGA 148473 || | |||||| ||||||| || ||| || || |||||||| ||||| | Sbjct 50895 TGCCGTGGTTCTTGCGC---AGATCCATGAACTCAAAGACATCGGCGTGCCAGGGCTCAA 50951 Query 148474 TGTATACGGTCATGGCGCCTTTCC---TTTTACCTCCTTGATCGACATGGCGTAGCATGC 148530 ||| | || | ||| || | | ||||| ||||||||||| | ||| | || Sbjct 50952 GGTAAATGGCGAAGGCACCAGGACGCTTATTACCACCTTGATCGACGTAGCGAGCCGTGT 51011 Query 148531 TATTAAAAACACG 148543 |||| || ||||| Sbjct 51012 TATTGAAGACACG 51024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478660479367120