Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016
-10-21] 321 sequences; 48,556,462 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq6 86.0 5e-12
>seq6
Length=179136
Score = 86.0 bits (94), Expect = 5e-12
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| |||| || ||||| |||||||| || ||||||||||||| || || |||||
Sbjct 30597 AGAACCAAGTGGAGCGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTGCGACCGTCC 30538
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | ||| ||||| || | ||||| ||||| ||||| || | |||||| |||||
Sbjct 30537 TCAAGTTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 30478
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
||| | | |||||| | | | | || || | ||| || | |||||||||
Sbjct 30477 TGAATCTTCGACTTCACATTGTCGATGGTATCAGAAGACTCAACCTCAAGGGTGATGGTC 30418
Query 16904 TTTCCGGTCAGCGTTTTGAC 16923
|| ||||| || || |||||
Sbjct 30417 TTGCCGGTGAGGGTCTTGAC 30398
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405086415219790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |