Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016 -10-21] 321 sequences; 48,556,462 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 8e-12 >seq7 Length=178947 Score = 86.0 bits (94), Expect = 8e-12 Identities = 108/146 (74%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 15054 AGATTGGCGACAAGTTTTGCTCTGGT-ATGGCGCAAAAGGGCACGTGCGGCATGATTTTC 15112 ||||||| ||||| ||| ||| || | ||| ||||||||||| || | | || Sbjct 146458 AGATTGGTGACAAATTTGCCTCACGTCACGGC-CAAAAGGGCACCATTGGTGTCACTTAT 146400 Query 15113 CCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAACCCC 15172 | |||||||| ||||||||||||| || || ||||| |||||||||||||| || Sbjct 146399 CGGCAGGAAGATATGCCCTTTACCGGCGAGGGTATTACGCCGGACATTATCATCAATCCT 146340 Query 15173 AACTGCATCCCGTCCCGCATGACCAT 15198 || ||| ||||| || |||||||| Sbjct 146339 CACGCCATTCCGTCTCGTATGACCAT 146314 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611389546789600