Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016
-10-21] 321 sequences; 48,556,462 total letters
Query= NC_008187.1
Length=191100
Score E
Sequences producing significant alignments: (Bits) Value
seq7 86.0 8e-12
>seq7
Length=178947
Score = 86.0 bits (94), Expect = 8e-12
Identities = 108/146 (74%), Gaps = 2/146 (1%)
Strand=Plus/Minus
Query 15054 AGATTGGCGACAAGTTTTGCTCTGGT-ATGGCGCAAAAGGGCACGTGCGGCATGATTTTC 15112
||||||| ||||| ||| ||| || | ||| ||||||||||| || | | ||
Sbjct 146458 AGATTGGTGACAAATTTGCCTCACGTCACGGC-CAAAAGGGCACCATTGGTGTCACTTAT 146400
Query 15113 CCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAACCCC 15172
| |||||||| ||||||||||||| || || ||||| |||||||||||||| ||
Sbjct 146399 CGGCAGGAAGATATGCCCTTTACCGGCGAGGGTATTACGCCGGACATTATCATCAATCCT 146340
Query 15173 AACTGCATCCCGTCCCGCATGACCAT 15198
|| ||| ||||| || ||||||||
Sbjct 146339 CACGCCATTCCGTCTCGTATGACCAT 146314
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 611389546789600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |