Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016
-10-21] 321 sequences; 48,556,462 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq6 131 1e-25
>seq6
Length=179136
Score = 131 bits (144), Expect = 1e-25
Identities = 153/204 (75%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| |||||||| || | ||||| | ||||| ||||| ||
Sbjct 30842 ATGCAGATCTTCGTCAAGACATTGACCGGAAAGACAATCACGTTAGAAGTCGAGTCTTCC 30901
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || ||||| | || | ||| ||||| || || || |||||||||||
Sbjct 30902 GACACGATTGACAACGTGAAGTCCAAGATTCAG-GACAAGGAGGGCATCCCACCTGACCA 30960
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| | ||||| || ||||| ||||| ||||| | ||||| || ||||||||||
Sbjct 30961 GCAGCGTCTCATTTTCGCTGGCAAGCAATTGGAAGACGGCCGCACCTTGAGCGATTACAA 31020
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
||||| || ||||| ||||| ||
Sbjct 31021 CATTCAGAAGGAATCTACGCTTCA 31044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433326304739615
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |