Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016 -10-21] 321 sequences; 48,556,462 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq6 131 1e-25 >seq6 Length=179136 Score = 131 bits (144), Expect = 1e-25 Identities = 153/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||||||| || | ||||| | ||||| ||||| || Sbjct 30842 ATGCAGATCTTCGTCAAGACATTGACCGGAAAGACAATCACGTTAGAAGTCGAGTCTTCC 30901 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || ||||| | || | ||| ||||| || || || ||||||||||| Sbjct 30902 GACACGATTGACAACGTGAAGTCCAAGATTCAG-GACAAGGAGGGCATCCCACCTGACCA 30960 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | ||||| || ||||| ||||| ||||| | ||||| || |||||||||| Sbjct 30961 GCAGCGTCTCATTTTCGCTGGCAAGCAATTGGAAGACGGCCGCACCTTGAGCGATTACAA 31020 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 ||||| || ||||| ||||| || Sbjct 31021 CATTCAGAAGGAATCTACGCTTCA 31044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433326304739615