Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016 -10-21] 321 sequences; 48,556,462 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq6 118 9e-22 >seq6 Length=179136 Score = 118 bits (130), Expect = 9e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||||||||| || ||||||||||||||||||| || || ||||| | ||| || || Sbjct 31039 CGTAGATTCCTTCTGAATGTTGTAATCGCTCAAGGTGCGGCCGTCTTCCAATTGCTTGCC 30980 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 |||| | ||||||||||| ||||| || || ||||| || ||||| |||||| || Sbjct 30979 AGCGAAAATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCCTGAATCTTGGACTT 30920 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | |||| ||||||| || ||||| || | || | || || ||||||| || Sbjct 30919 CACGTTGTCAATCGTGTCGGAAGACTCGACTTCTAACGTGATTGTCTTTCCGGTCAATGT 30860 Query 114365 TTTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 30859 CTTGACGAAGATCTGCAT 30842 Score = 114 bits (126), Expect = 1e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || | | ||| || || | |||||| || || ||||||||||| ||| Sbjct 30615 ATACCGCCACGGAGACGGAGAACCAAGTGGAGCGTAGACTCCTTCTGAATGTTGTAGTCG 30556 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||| ||| || |||||||| || || ||| |||| |||||||| ||||| || Sbjct 30555 GACAGAGTGCGACCGTCCTCAAGTTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCAGGG 30496 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| |||||| || | | || | ||| || | || || Sbjct 30495 GGAATGCCCTCCTTGTCCTGAATCTTCGACTTCACATTGTCGATGGTATCAGAAGACTCA 30436 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370 || || | ||| | || |||||||| || || || || Sbjct 30435 ACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGAC 30398 Score = 102 bits (112), Expect = 7e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| || || | ||||| || || ||||| ||||| ||| Sbjct 30331 ATACCACCACGAAGGCGGAGAACCAAGTGAAGGGTAGACTCCTTCTGAATATTGTAGTCG 30272 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || || ||||| || || |||||| |||| |||||||||||||| || Sbjct 30271 GAAAGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGTTGGTCTGGG 30212 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| |||||| || | | |||| || |||| ||||||| Sbjct 30211 GGGATGCCTTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTATCGGAGGATTCG 30152 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGT 114358 || || | || | || |||||||| Sbjct 30151 ACCTCAAGAGTGATGGTCTTGCCGGT 30126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420132756355452