Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016
-10-21] 321 sequences; 48,556,462 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq49 358 1e-93
seq179 246 6e-60
>seq49
Length=112291
Score = 358 bits (396), Expect = 1e-93
Identities = 1155/1763 (66%), Gaps = 71/1763 (4%)
Strand=Plus/Plus
Query 243874 GAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGGCCATGGTGATGA- 243932
|| |||||||||||| |||||||| ||||| | || || || ||||| | |
Sbjct 49720 GATGTTGAGGGACTGTGACTGGTCGATGAAGGCACCGCGGTCGGCAGCCATCTGCACAAC 49779
Query 243933 GGTCCT-TCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGG--GGA 243989
||| | | ||||| || || ||| |||||||| | | ||| | ||||| |||
Sbjct 49780 GGTACGCTGGGAGATTTCCCAGACG--GTCTTGTACAGAGCCTTTAC---CTCGGCAGGA 49834
Query 243990 ACCCTTCG-ATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCG 244048
| | | |||||||| || || || || | | |||||| || | |||| |||
Sbjct 49835 ATGTTGGGGATGTTCTGGACGGAACCGTTCTCGGCGATGATACGGTTCTTCATGGCATCA 49894
Query 244049 TTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTGTTCACCACCTGAAACTCT 244108
||||| ||||| | | || | | | ||| ||| || || || ||||||
Sbjct 49895 GACCACAAGCCCATGTCGACGAGATCTTTCAACAGCCAGGGGTTGACGACTTGGAACTCT 49954
Query 244109 CCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTG 244168
|| | || || || |||||||| | |||| | || |||| || ||| |||||
Sbjct 49955 CCAGCAAGAACACGACGCTGGTAAATGTTGGACGTATAGGGTTCGAAGCACTCGTTGTTG 50014
Query 244169 CCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACG 244228
|||| ||||||| ||| ||||| |||||||| | || ||||||||||| | ||
Sbjct 50015 CCCAAAATCTGCGAAGTGGAGGCAGTAGGCATGGGAGCAACGAGCAGACTGTTGCGGACA 50074
Query 244229 CCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCC---AGTCCCACATGCCCGAGAGGTCC 244285
|| ||| || ||| ||| ||| ||| ||||||| || || | |||||
Sbjct 50075 CCATGCTCCTTGAT-------CTG--CTCCTTCAGAGAGTCCCA-ATCCC--AAAGGTCA 50122
Query 244286 TCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCG 244345
| | |||| ||||||||| |||| || | |||| | || |||||||
Sbjct 50123 GAGGGCTTGACATTCCACATGTCGTACTGGAGGATGCCCTGAGAAATAGGAGAGCCCTCG 50182
Query 244346 TAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTA-CAGCTCTCGTCGAGGGCGGCGTA 244404
|| || | ||||| ||| || || ||||| || | | | | ||| || || || |
Sbjct 50183 TACGTGGAGTAGGTACCTTCCTCCTTGGCCAACTGAACCGACATAGTC-AGAGCAGCATG 50241
Query 244405 GTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGT--GAAGGGG 244462
||| |||||||| |||||| ||||||| | ||| ||||||| | | || | ||| ||
Sbjct 50242 GTAAATGGTCTCAAAGATCTTCTTGTTGAGGTCACGGGCCT--CAGGAGATTCGAATGGC 50299
Query 244463 ATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGT 244522
|||| | | ||| | ||||| || ||||| || || | |||||||| | |||
Sbjct 50300 ATGCGAAGGGCGAGGAAAGCATCGGCAAGACCCTGGACACCAAGACCGATGGGACGGTGA 50359
Query 244523 CGCTTGTTGG-AGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTT 244581
||| ||||| | || ||| || || |||||||| |||| | || || | ||||||
Sbjct 50360 CGCATGTTGCTATTGCG-GGCCTCAGGAACGGGGTAGTGGTTGACATCAATGATCTTGTT 50418
Query 244582 GAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGG 244641
| |||||| || | | ||| || ||| ||| |||||||| |
Sbjct 50419 CAAGTTGCGAACGACGACCTGAGTGACCTCATGAAGCTTCTGGAAGTCGTAGAC------ 50472
Query 244642 ATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGAC 244701
| ||||| | | || | | ||| | | ||||||| |||| |||||||||
Sbjct 50473 ACCCTCGTTG-TAGTCAACG----AAAGTAGGA-AGGGCGAGAGAAGCCAAGTTGCAGAC 50526
Query 244702 GGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGAT 244761
|| ||||| || | | | ||||| | ||||| ||||||||||| || |||
Sbjct 50527 AGCGACCTCATCAGGGGCGCAGTACTCAATGATCTCAGTGCAGAGGTTGGAGCTGCGGAT 50586
Query 244762 GGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGG 244821
|||||| |||| || || ||| |||| ||| ||| |||||||| |||||||| ||
Sbjct 50587 GGTGCCGAGGTTCTTCTGGTTGCTCTTGCGGTTTGCGGCATCCTTGTAAAGCATGAAAGG 50646
Query 244822 CCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGT 244881
|| ||||| ||| || |||| | || ||| || | | ||||||| ||
Sbjct 50647 GTTGCCAGTCTCAGTCTGAGCCTCGAGAATTGCGTACCAAAGCTTCTGGGCCTTGATGGT 50706
Query 244882 CCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACTCGGGGCCCCA 244941
| ||||| |||||||||| |||||| ||||| |||||||||||| ||| |
Sbjct 50707 CTTGCGACCCTTGCCCTCCCGCTCGTACTTCTCGTACAAGGCCTCGAACTCCTCGCCGTA 50766
Query 244942 GACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGCCGCCGTCCTT 245001
| || | || ||||||||| || |||||||| |||| || || | ||
Sbjct 50767 GCAGTCAGCCAGACCGGGGCACTCATTGGGACACATGAGGGTCCAGTCAGCGTTCTTCTC 50826
Query 245002 GACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTG 245061
||| |||| |||||| || ||||||||||||||||| |||| ||||| | | |
Sbjct 50827 GACTCTCTTCATGAATAGATCGGGGATCCAGAGGGCAAGGAAAAGGTCGCGAGCACGGAC 50886
Query 245062 CTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGG 245121
||| ||| ||| |||||| | ||| |||| || |||||||| ||| ||||||||||
Sbjct 50887 CTCCTCCTTGCCGTGGTTCTTGCGCAGATCCATGAACTCAAAGACATCGGCGTGCCAGGG 50946
Query 245122 CTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTC 245181
||| | ||| | |||| ||| || || ||||| || || || || || | | | |
Sbjct 50947 CTCAAGGTAAATGGCGAAGGCACCAGGACGCTTATTACCACCTTGATCGA----CGTAGC 51002
Query 245182 GAG-CGCG---TTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGC 245237
||| || | ||||||| || || | || | | ||||| ||| |||||||||||
Sbjct 51003 GAGCCGTGTTATTGAAGACACGAAGCATGGGGATGACTCCGTTCGAGGTGCCGTTGGTGC 51062
Query 245238 CCTTGATGTAGGCGCCCTTGCCCC---TGAGGTTGCTGATGGACATGCCTAGTCCGCCGG 245294
| || |||| ||| || | | || ||| | | || | || | || ||||
Sbjct 51063 CGGCAATATAGGAGCCAGTGGCACGGATGCGGTGGGCGTTG---AGACCAATGCCACCGG 51119
Query 245295 CGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCG 245354
| ||||||||| | ||||||| |||||| ||||| || ||||| ||| |||
Sbjct 51120 CCATCTTGGAGATCATGGCGCAGGTCTTGAGCGTGTCGTAGATACCCTCAATGGAGTCTT 51179
Query 245355 ACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACA 245414
|||||||| || || ||||| || ||||||||| || ||| | | | |||||| |
Sbjct 51180 CCTTCATGTCGACGAGGAAGCAAGAAGACAGCTGGCACTGAGGGGTACCGGCGTTGAAGA 51239
Query 245415 GAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCGTACGTCTGGA-GCAGA 245473
| ||||| ||||||||| ||| | ||| || | || ||| |||| || | |
Sbjct 51240 GTGTGGGAGAGGCGTGGGTGAAGAACTTGCTGGACATCAAGTTGTAGGTCTCGATGACGC 51299
Query 245474 GCGTCGATGTTGTCGCCGTGGATCTGCAGGGCGCA--CCTCATGAGGGTGTGCTGGGGCG 245531
|| || | |||||| || || ||| | ||| | ||||| ||||||| ||
Sbjct 51300 GC-TCAACGTTGTCACCCCAGA--TGCCGACTGCAACACGCATGATCATGTGCTGCGGTC 51356
Query 245532 TCTCG---ATGGGTCCCTCGGGTCCCTTGAGCATGTAGGAGCGCTCGAGCGTCTTGAACC 245588
||||| || || ||| | |||||| | ||| || | ||| || |||||||| |
Sbjct 51357 TCTCGGCAATCTTGCCGTCGAG---CTTGAGTAGGTATGATCTCTCCAGGGTCTTGAAGC 51413
Query 245589 CAAAGTACGAGTAGCCAAAGTCG 245611
| ||||| |||| ||||||
Sbjct 51414 CGAAGTATTGGTAGTTGAAGTCG 51436
>seq179
Length=397792
Score = 246 bits (272), Expect = 6e-60
Identities = 595/901 (66%), Gaps = 60/901 (7%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| ||||||||||||||||||||| |||
Sbjct 380367 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATTGATCTG 380426
Query 42360 GCCAAGGACACGGCCGGCTGGGAGT-CACTGTCTGAGA--ACGAAAAGTTTTTCCTCAAA 42416
||||||| || |||| | || || || | || |||| ||| ||
Sbjct 380427 TCCAAGGATCTCCACGACTGGAACAACAAGATCAACGATGATGAGAAGTACTTCATCTCC 380486
Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476
|||| || |||||||||||||| || |||||||| |||||||||||||| | |
Sbjct 380487 CACATCCTCGCCTTCTTCGCCGCATCCGACGGCATCGTCAATGAGAACCTCGTTGAGCGC 380546
Query 42477 TTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATA 42536
|||| ||||| ||| ||||| || ||||||||||| |||||||| ||
Sbjct 380547 TTCAGCGGCGAGGTCCAGATTCCCGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGATG 380606
Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596
|||||| | ||||||||| ||| | ||| || |||| |||||| ||| || |
Sbjct 380607 GAGAACATTCACTCTGAGACCTACTCGCTACTCATCGACACCTACATCAAGGAGCCTGCG 380666
Query 42597 GAGCGTAACGGGCTGTTCAAGGCCATGGAGAC------GATGCC---------------- 42634
|||| | || || || ||||| || || | || |
Sbjct 380667 CAGCGCACGTACCTCTTTAACGCCATTGACACTAGTATGTTGACATGACATGTACTGTGA 380726
Query 42635 CTGCATC---AA--------GAAG-----------------AAGGCGGACTGGGCGCTCA 42666
|||||| || | || ||||| |||||||| | |
Sbjct 380727 ATGCATCGCTAACTCGCATTGCAGTCCCCGCCATTCGCAAGAAGGCCGACTGGGCCTTGA 380786
Query 42667 ACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTC 42725
| |||||| || | | || | || | |||| | || | ||||| ||||| |||| ||
Sbjct 380787 AATGGATC-AGCGACGAGAGCTCATCCTTCGCCCAGCGTCTGGTTGCCTTCGCCGCTGTT 380845
Query 42726 GAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGGTGTC 42784
||||| ||||||||| || || ||||||||||| |||||||||||| || ||| ||
Sbjct 380846 GAGGGTATCTTCTTCAGCGGTGCGTTCGCCTCCATTTTCTGGCTCAAGAAGCGTGGTCTC 380905
Query 42785 GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGA 42844
||||| || || |||||||| ||||| |||||| | |||||||| ||||| | ||
Sbjct 380906 -ATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGCGACGAGGGCCTGCACACTGA 380964
Query 42845 CTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGGGTCCG 42904
|||||||||||| ||| ||| ||||||| |||| ||| ||| || |
Sbjct 380965 CTTTGCCTGCCTATTGTACTC---TCACCTCAAGCACCGCCCCAACAAGCAGGTTATTGA 381021
Query 42905 GGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGT 42964
|| |||||| || || || |||| ||| |||||||| | || || | |||||
Sbjct 381022 GGACATCATTGTCGATGCGGTCAAGATTGAGCAGGAGTTCTTGACTGAGGCTCTGCCTTG 381081
Query 42965 GTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACCA 43024
| || ||||||||||| | || | ||| ||||||| ||| ||| || ||||
Sbjct 381082 CGCTCTCCTCGGCATGAACTCCAACTTGATGAAGCAGTACATTGAGTTCGTTGCTGACCG 381141
Query 43025 TCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACTTTAT 43084
|||| || | | || | | ||||||| | | ||||||||| || ||
Sbjct 381142 TCTCTTGGTCGCTCTTGGCAACGACAAGGTCTACAAGTCTTCCAACCCCTTCGATTTCAT 381201
Query 43085 GGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACTACCA 43144
||||||||| || | | || ||||||||||| ||||||||||| || |||||||||||
Sbjct 381202 GGAGAACATTTCCCTCGGCGGAAAGACCAACTTCTTCGAGAAGCGTGTTGCCGACTACCA 381261
Query 43145 G 43145
|
Sbjct 381262 G 381262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944335410838960
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