Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016 -10-21] 321 sequences; 48,556,462 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq6 98.7 8e-16 >seq6 Length=179136 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 33913 CGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGCTCG 33972 || || || || |||||||| |||||||||||||||||||| ||| || || Sbjct 31056 CGGAGGACAAGGTGAAGCGTAGATTCCTTCTGAATGTTGTAATCGCTCAAGGTGCGGCCG 30997 Query 33973 TCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCTTTG 34032 || |||||||||||||| || || || || |||||||| || || | || ||| ||| Sbjct 30996 TCTTCCAATTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTG 30937 Query 34033 TCCATAATTTTTTGCTTAATGGAACTCACAC-TATCAGTAGATTCGCATTCGACCGTTAT 34091 ||| ||| || ||| | | ||| | | || | ||| ||| ||| | ||| || Sbjct 30936 TCCTGAATCTTGGACTTCA-CGTTGTCAATCGTGTCGGAAGACTCGACTTCTAACGTGAT 30878 Query 34092 TGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||| |||||||| | ||| || || ||||| ||||| Sbjct 30877 TGTCTTTCCGGTCAATGTCTTGACGAAGATCTGCAT 30842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397060846617442