Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016
-10-21] 321 sequences; 48,556,462 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq6 98.7 8e-16
>seq6
Length=179136
Score = 98.7 bits (108), Expect = 8e-16
Identities = 153/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 33913 CGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGCTCG 33972
|| || || || |||||||| |||||||||||||||||||| ||| || ||
Sbjct 31056 CGGAGGACAAGGTGAAGCGTAGATTCCTTCTGAATGTTGTAATCGCTCAAGGTGCGGCCG 30997
Query 33973 TCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCTTTG 34032
|| |||||||||||||| || || || || |||||||| || || | || ||| |||
Sbjct 30996 TCTTCCAATTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTG 30937
Query 34033 TCCATAATTTTTTGCTTAATGGAACTCACAC-TATCAGTAGATTCGCATTCGACCGTTAT 34091
||| ||| || ||| | | ||| | | || | ||| ||| ||| | ||| ||
Sbjct 30936 TCCTGAATCTTGGACTTCA-CGTTGTCAATCGTGTCGGAAGACTCGACTTCTAACGTGAT 30878
Query 34092 TGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
||| |||||||| | ||| || || ||||| |||||
Sbjct 30877 TGTCTTTCCGGTCAATGTCTTGACGAAGATCTGCAT 30842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397060846617442
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |