Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016 -10-21] 321 sequences; 48,556,462 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq179 87.8 4e-12 >seq179 Length=397792 Score = 87.8 bits (96), Expect = 4e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 243568 GGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATC 243627 ||||||||||| | | ||| |||||||| || ||||| || ||||| | || || Sbjct 381092 GGCATGAACTCCAACTTGATGAAGCAGTACATTGAGTTCGTTGCTGACCGTCTCTTGGTC 381151 Query 243628 GCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATT 243687 || ||||| | || || || ||||| || |||||||| | || |||||| |||| Sbjct 381152 GCTCTTGGCAACGACAAGGTCTACAAGTCTTCCAACCCCTTCGATTTCATGGAGAACATT 381211 Query 243688 TCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 || || || || || ||||||||||| |||||||| Sbjct 381212 TCCCTCGGCGGAAAGACCAACTTCTTCGAGAAGCGTGT 381249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102875464061350