Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016
-10-21] 321 sequences; 48,556,462 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq49 280 1e-70
>seq49
Length=112291
Score = 280 bits (310), Expect = 1e-70
Identities = 1071/1666 (64%), Gaps = 28/1666 (2%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | |||||| || ||||||| || ||||| |||||| | || |||
Sbjct 51429 AACTACCAATACTTCGGCTTCAAGACCCTGGAGAGATCATACCTACTCAAGCTCGACGGC 51370
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || ||||| ||||||| || || | ||||| || || |||| || || ||
Sbjct 51369 AAGATTGCCGAGAGACCGCAGCACATGATCATGCGTGTTGCAGTCGGCATCTGGGGTGAC 51310
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
|| | | || | | | | || ||| |||| | ||| |||
Sbjct 51309 AACGTTGAGCGCGTCATCGAGACCTACAACTTGATGTCCAGCAAGTTCTTCACCCACGCC 51250
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCG--GTGCCACAGATGTCTTCGTGTTTCCTGA 93952
| || || || |||||||| || ||||| |||||| | ||||||| || |||||
Sbjct 51249 TCTCCCACACTCTTCAACGCCGGTACCCCTCAGTGCCA--GCTGTCTTCTTGCTTCCTCG 51192
Query 93953 T-GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011
| ||| | |||| |||||||| || || | ||||| |||||| ||| || |
Sbjct 51191 TCGAC-ATGAAGGAAGACTCCATTGAGGGTATCTACGACACGCTCAAGACCTGCGCCATG 51133
Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071
||||| || || || || || || ||| | |||| | | ||||||| || |||
Sbjct 51132 ATCTCCAAGATGGCCGGTGGCATTGGTCTCAACGCCCACCGCATCCGTGCCACTGGCTCC 51073
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
|| || ||| ||||| |||||||| ||||| || |||| ||||| || ||||||||
Sbjct 51072 TATATTGCCGGCACCAACGGCACCTCGAACGGAGTCATCCCCATGCTTCGTGTCTTCAAT 51013
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| |||| |||||||| || || |||||| | | | ||| | ||||| | ||
Sbjct 51012 AACACGGCTCGCTACGTCGATCAAGGTGGTAATAAGCGTCCTGGTGCCTTCGCCATTTAC 50953
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
|| |||||||||||||| || || | ||||| || ||||| ||||||||||||||
Sbjct 50952 CTTGAGCCCTGGCACGCCGATGTCTTTGAGTTCATGGATCTGCGCAAGAACCACGGCAAG 50893
Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311
|| || | || | ||||| ||| || |||||| | || || || || |||||
Sbjct 50892 GAGGAGGTCCGTGCTCGCGACCTTTTCCTTGCCCTCTGGATCCCCGATCTATTCATGAAG 50833
Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371
| |||||||| ||| | | ||||| || | ||||||||||| || ||||| ||| |
Sbjct 50832 AGAGTCGAGAAGAACGCTGACTGGACCCTCATGTGTCCCAATGAGTGCCCCGGTCTGGCT 50773
Query 94372 GACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCC 94431
||| | || | || || | |||||| | ||||| | |||||||||
Sbjct 50772 GACTGCTACGGCGAGGAGTTCGAGGCCTTGTACGAGAAGTACGAGCGGGAGGGCAAGGGT 50713
Query 94432 AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACG 94491
| ||| || | || |||||| ||| | || | || | ||| |||||
Sbjct 50712 CGCAAGACCATCAAGGCCCAGAAGCTTTGGTACGCAATTCTCGAGGCTCAGACTGAGACT 50653
Query 94492 GGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTC 94551
|| | || | ||| | | |||||| | | ||| |||| ||||||| || |||||
Sbjct 50652 GGCAACCCTTTCATGCTTTACAAGGATGCCGCAAACCGCAAGAGCAACCAGAAGAACCTC 50593
Query 94552 GGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAG 94611
|| ||| ||||| || || ||||| ||||| | ||||| | || || |||
Sbjct 50592 GGCACCATCCGCAGCTCCAACCTCTGCACTGAGATCATTGAGTACTGCGCCCCTGATGAG 50533
Query 94612 ATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACG 94671
| ||||| || ||| ||| || || ||| | |||||||| || |||||
Sbjct 50532 GTCGCTGTCTGCAACTTGGCTTCTCTCGCCCTTCCTACTTTCGT------TGACTACA-- 50481
Query 94672 TCTACTGCTTCGTTCGATCTGGAGGAGCTT-GTGAACT-TCGCGGGAAGGATGGTCTTGA 94729
| | | || | ||| | || ||||| ||| | | | || | | || |
Sbjct 50480 ACGAGGGTGTC-TACGACTTCCAGAAGCTTCATGAGGTCACTCAGGTCG--TCGTTCGCA 50424
Query 94730 ACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACC 94789
|| |||||| | | || || ||| ||||||||| || ||||| || |||
Sbjct 50423 ACTTGAACAAGATCATTGATGTCAACCACTACCCCGTTCCTGAGGCCCGCAATAGCAACA 50364
Query 94790 TGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGC 94849
|| || || |||||||| | || ||||||||| | || || || | | | |
Sbjct 50363 TGCGTCACCGTCCCATCGGTCTTGGTGTCCAGGGTCTTGCCGATGCTTTCCTCGCCCTTC 50304
Query 94850 GTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTT 94909
| |||| | ||| ||| || || | | || ||| || || || | |||||
Sbjct 50303 GCATGCCATTCGAATCTCCTGAGGCCCGTGACCTCAACAAGAAGATCTTTGAGACCATTT 50244
Query 94910 ATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAAT 94969
| | | || ||| || || || ||||||| ||| | || | ||
Sbjct 50243 ACCATGCTGCTCTGACTATGTCGGTTCAGTTGGCCA---AGGAGGAAGGTACCTACTCCA 50187
Query 94970 CGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGC 95029
||| | || || || | |||||||| | |||| |||| | ||| ||| ||||
Sbjct 50186 CGTACGAGGGCTCTCCTATTTCTCAGGGCATCCTCCAGTACGACATGTGGAATGTCAAGC 50127
Query 95030 CCTCGGGTCTGTACGACTGGGAAGCTCT--ACGCGCTGATGTTATCAAACACGGTGTGAA 95087
|||| | || | || ||||| |||| | | || || | | | || |||||
Sbjct 50126 CCTCTGACCTTTGGGATTGGGACTCTCTGAAGGAGCAGA--TCAAGGAGCATGGTGTCCG 50069
Query 95088 AAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAA 95147
||| ||||| || || |||||||| || |||||||| ||||||| | ||||||||
Sbjct 50068 CAACAGTCTGCTCGTTGCTCCCATGCCTACTGCCTCCACTTCGCAGATTTTGGGCAACAA 50009
Query 95148 CGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATT 95207
||||| |||||||||| || |||||| | ||| | | || || || || || || ||
Sbjct 50008 CGAGTGCTTCGAACCCTATACGTCCAACATTTACCAGCGTCGTGTTCTTGCTGGAGAGTT 49949
Query 95208 CCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTGACA 95266
|| ||| ||||| || | || || | || | |||| ||||| |||
Sbjct 49948 CCAAGTCGTCAACCCCTGGCTGTTGAAAGATCTCGTCGAC-ATGGGCTTGTGGTCTGATG 49890
Query 95267 AGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGG 95326
| ||||||| | | || ||||| ||||||||||||||||| | || || |
Sbjct 49889 CCATGAAGAACCGTATCATCGCCGAGAACGGTTCCGTCCAGAACATCCCCAACATTCCTG 49830
Query 95327 AGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
|| | ||||| || ||||||||||| ||||| ||| | |||||
Sbjct 49829 CCGAGGTAAAGGCTCTGTACAAGACCGTCTGGGAAATCTCCCAGCG 49784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494721214923160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |