Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016
-10-21] 321 sequences; 48,556,462 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq49 185 1e-41
seq179 102 1e-16
>seq49
Length=112291
Score = 185 bits (204), Expect = 1e-41
Identities = 615/938 (66%), Gaps = 33/938 (4%)
Strand=Plus/Plus
Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516
|||||||||| || ||||| ||||| ||||| |||||| | |||||| |
Sbjct 50498 GGAAGGGCGAGAGAAGCCAAGTTGCAGACAGCGACCTCATCAGGGGCGCAGTACTCAATG 50557
Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576
|| || || || | |||||| || || || || | ||||| ||||| ||||| |
Sbjct 50558 ATCTCAGTGCAGAGGTTGGAGCTGCGGATGGTGCCGAGGTTCTTCTGGTTGCTCTTGCGG 50617
Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636
|| ||||||||||| |||||| | || | || ||||| ||||| | || |||||||
Sbjct 50618 TTTGCGGCATCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCAGTCTGAGCCTCGAGAATT 50677
Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTG-GCCCGT--CCCTCCGCCTCGTA 106692
|| | ||| | | || | | || | |||| ||| | || | |||||| ||||||
Sbjct 50678 GCGTACCAAAGCTTCTGGGCCTTG----ATGGTCTTGCGACCCTTGCCCTCCCGCTCGTA 50733
Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 106752
||| ||| | ||| || |||||||| || ||| | ||||| || || |
Sbjct 50734 CTTCTCGTACAAGGCCTCGAACTCCTCGCCGTAGCAGTCAGCCAGACCGGGGCACTCATT 50793
Query 106753 TGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 106812
||||| | || | ||| | | | || ||| || | ||||||||| || || || ||
Sbjct 50794 GGGACACATGAGGGTCCAGTCAGCGTTCTTCTCGACTCTCTTCATGAATAGATCGGGGAT 50853
Query 106813 CCACAGGG-ATGAAAAGAGATCTCTA-CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGT 106870
||| |||| | | ||| || || | | ||| || |||| || | || ||||| ||
Sbjct 50854 CCAGAGGGCAAGGAAA-AGGTCGCGAGCACGGA-CCTCCTCCTTGCCGTGGTTCTTGCGC 50911
Query 106871 AACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCC 106930
| || | |||||| | || ||| |||||||| |||||||| || | |||| | ||
Sbjct 50912 AGATCCATGAACTCAAAGACATCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAGGCACC- 50970
Query 106931 TTTCGACGC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 106984
||||| ||| |||||| || ||||| || ||| || || || ||||||
Sbjct 50971 --AGGACGCTTATTACCACCTTGATCGACGTAGCGAGCCGTGTTATTGAAGACACGAAGC 51028
Query 106985 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTC 107044
|| || || | || | || || || || || |||| || | |||| |
Sbjct 51029 ATGGGGATGACTCCGTTCGAGGTGCCGTTGGTGCCGGCAATATAGGAGCCAGTGGCACGG 51088
Query 107045 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 107104
| ||| || | ||||| || || ||| ||| ||||| || || | |
Sbjct 51089 ATGCGGTGGGCGTTGAGACCAATGCCACCGGCCATCTTGGAGATCATGGCGCAGGTCTTG 51148
Query 107105 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 107164
|| || | |||||||| | || ||||| ||||| || ||| ||||||||| |||
Sbjct 51149 AGCGTGTCGTAGATACCCTCAATGGAGTCTTCCTTCATGTCGACGAGGAAGCAAGAAGAC 51208
Query 107165 ATCTGCGGTCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACC 107223
| ||| | || || ||||| || |||||||| || || | ||||| ||| | | |
Sbjct 51209 AGCTG-GCACTGAGGGGTACCGGCGTTGAAGAGTGTGGGAGAGGCGTGGGTGA--AGAAC 51265
Query 107224 TTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCG 107281
||| ||||||| || ||| ||||| | ||| |||| || || || |||||||
Sbjct 51266 TTGCTGGACATCAAGTTGTAGGTCTCGATGACGCGCTCAACGTTGTCACCCCAGATGCCG 51325
Query 107282 ATGGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGA 107341
| || |||||||| | ||||| || ||| | || | |||| |||||| ||||
Sbjct 51326 ACTGCAACACGCATGATCATGTGCTGCGGTCTCTCGGCAATCTTGCCGTCGAGC--TTGA 51383
Query 107342 --AGATA-GCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376
|| || | || |||| ||||| |||| || |||||
Sbjct 51384 GTAGGTATGATC-TCTCCAGGGTCTTGAAGCCGAAGTA 51420
>seq179
Length=397792
Score = 102 bits (112), Expect = 1e-16
Identities = 149/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332
|||||| || ||| || ||||| || || || || || || || |||||| || ||
Sbjct 380971 GGCAAAGTCAGTGTGCAGGCCCTCGTCGCGAGAGATGAGCTCGTTGGAGAAGGTCAGACC 380912
Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392
||||||||||| |||||||| | ||| |||| | | ||| | ||| |||||||||
Sbjct 380911 AGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAGGCGAACGCACCGCTGAAGAAGAT 380852
Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAA 117451
|||||| ||| || || |||| || |||| ||||||||| ||| | || | |
Sbjct 380851 ACCCTCAACAGCGGCGAAGGCAACCAGACGCTGGGCGAAGGA-TGAGCTCTCGTCGCTGA 380793
Query 117452 ACCATTTCATTGCCCATTTCGCCTTCTT 117479
|||||||| ||||| | ||||||||
Sbjct 380792 TCCATTTCAAGGCCCAGTCGGCCTTCTT 380765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589978432702040
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