Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016 -10-21] 321 sequences; 48,556,462 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq6 89.7 3e-13 >seq6 Length=179136 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || |||||||||||||| ||||| ||| | || |||| || ||||| ||||| ||||| Sbjct 30804 TCCTTCTGAATGTTATAATCCGACAGGGTGCGACCATCCTCGAGCTGCTTTCCAGCAAAG 30745 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | || |||||||| | || | ||||||||||| |||||| ||||| Sbjct 30744 ATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCTTGGATCTTCGACTTGACATTG 30685 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | || || |||| || || || || || || |||||||| || Sbjct 30684 TCAATGGTGTCTGAAGATTCGACCTCGAGCGTAATCGTCTTGCCTGTCAGAGTCTTGACG 30625 Query 34971 AAGATCTGCATA 34982 ||||| |||||| Sbjct 30624 AAGATTTGCATA 30613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324632329972488