Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016 -10-21] 321 sequences; 48,556,462 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq7 89.7 2e-12 >seq7 Length=178947 Score = 89.7 bits (98), Expect = 2e-12 Identities = 337/516 (65%), Gaps = 26/516 (5%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 || ||||| | |||||| |||||||||||||| || |||||||||||||| || || || Sbjct 145954 GCCCCGTGAGCAATCATGCAATCACGCTCCATCTCTCCGAAACGAAGACCTCCGTCACGG 146013 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGA-GATT--AACCATAGGACCGATGGAGCGGCTA 251601 || | |||||| |||| || | ||| | |||| ||| ||| || | ||| Sbjct 146014 GCACGACCCTCCACAGGTTGCCTAGTCATGATTTGAAC---AGGGCCACGCGCACGGGCG 146070 Query 251602 TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGAT- 251660 || ||| || | |||||||| | ||||||||| | | || || | ||||| Sbjct 146071 TGAATCTTGTCGTCGACCATATGGCGCAATCGCTGGTAGTAAGTCGGTCCAAAGAAGACT 146130 Query 251661 ---GCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGA 251717 ||||| || || || || || | | || ||||| | || ||| | || Sbjct 146131 TGCGCTCGCAGC---TTCCTG-CCTGTGTGGCCATTGTACATGATCTCAAATCCTCTTGA 146186 Query 251718 TTCATAACCAAGTT-TCT--GTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAA 251774 || || || | | || | |||| || | || || || || || | || Sbjct 146187 TTGGTATCCTTGATCTCGAAGGAGCTGCGAGACTGAGTCGACAGTCAC--ATCTG-TGAA 146243 Query 251775 ACTGGTGCCGTCTCCGTAAAGACCCATTTGAATCAACACTTTGCCTAAAAGTGTCTCTTT 251834 | |||| |||| || | | |||| | || || | || |||| | || ||| | Sbjct 146244 AGGGGTGGCGTCGCCCTCCATACCCTTCAGAGTCGATACCTTGCTGAGTAGACACTCGAT 146303 Query 251835 CAGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTT 251894 | || ||||| ||||||||| ||||| || || ||||||||||| ||||| || | Sbjct 146304 TAAGTGAGCGATGGTCATACGAGACGGAATGGCGTGAGGATTGATGATAATGTCCGGCGT 146363 Query 251895 CAGTCCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATAA-TGTTTCCAATAGTTCC 251951 | || || | || ||||||||||| ||||| | |||| || ||||| || || Sbjct 146364 AATACCCTCGCCGGTAAAGGGCATATC---TTCCTGCCGATAAGTGACACCAATGGTGCC 146420 Query 251952 CTTTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 |||||| |||||||| || || || |||||||| Sbjct 146421 CTTTTGGCCGTGACGTGAGGCAAATTTGTCACCAAT 146456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471811546690177