Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016 -10-21] 321 sequences; 48,556,462 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq7 87.8 7e-12 >seq7 Length=178947 Score = 87.8 bits (96), Expect = 7e-12 Identities = 119/163 (73%), Gaps = 5/163 (3%) Strand=Plus/Plus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| || || | ||||| ||||||||||| |||||||| |||| ||||||| |||||| Sbjct 146298 CTCGATTAAGTGAGCGATGGTCATACGAGACGGAATGGCGTGAGGATTGATGATAATGTC 146357 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTT-CTTCAGGTACAATCAAACCAA 309802 || | || || | | | || |||||||||| || | | || | | | ||||| Sbjct 146358 CGGCGTAATACCCTCG---CCGGTAAAGGGCATATCTTCCTGCCGATA-AGTGACACCAA 146413 Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 | || |||||||| |||| | || ||||| ||||||||||| Sbjct 146414 TGGTGCCCTTTTGGCCGTGACGTGAGGCAAATTTGTCACCAAT 146456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951966371895288