Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016
-10-21] 321 sequences; 48,556,462 total letters
Query= NC_023423.1
Length=610033
Score E
Sequences producing significant alignments: (Bits) Value
seq7 87.8 7e-12
>seq7
Length=178947
Score = 87.8 bits (96), Expect = 7e-12
Identities = 119/163 (73%), Gaps = 5/163 (3%)
Strand=Plus/Plus
Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743
||| || || | ||||| ||||||||||| |||||||| |||| ||||||| ||||||
Sbjct 146298 CTCGATTAAGTGAGCGATGGTCATACGAGACGGAATGGCGTGAGGATTGATGATAATGTC 146357
Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTT-CTTCAGGTACAATCAAACCAA 309802
|| | || || | | | || |||||||||| || | | || | | | |||||
Sbjct 146358 CGGCGTAATACCCTCG---CCGGTAAAGGGCATATCTTCCTGCCGATA-AGTGACACCAA 146413
Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845
| || |||||||| |||| | || ||||| |||||||||||
Sbjct 146414 TGGTGCCCTTTTGGCCGTGACGTGAGGCAAATTTGTCACCAAT 146456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1951966371895288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |