Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016 -10-21] 321 sequences; 48,556,462 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq6 132 9e-26 >seq6 Length=179136 Score = 132 bits (146), Expect = 9e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 ||||| ||||| || ||||| || |||||||| || || | | ||| || || || || Sbjct 30816 TGCAGGGTAGACTCCTTCTGAATGTTATAATCCGACAGGGTGCGACCATCCTCGAGCTGC 30757 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 |||||||||||||| | | || || || ||||| || || ||||| ||||| ||||| Sbjct 30756 TTTCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCTTGGATCTTC 30697 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 | || ||||| ||||| || || || ||| || || | || ||||||||||||||| Sbjct 30696 GACTTGACATTGTCAATGGTGTCTGAAGATTCGACCTCGAGCGTAATCGTCTTGCCTGTC 30637 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | ||||| || || || ||||| Sbjct 30636 AGAGTCTTGACGAAGATTTGCAT 30614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981823161928819