Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016
-10-21] 321 sequences; 48,556,462 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq6 93.3 1e-13
>seq6
Length=179136
Score = 93.3 bits (102), Expect = 1e-13
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | || ||||| || ||||| || ||||| || ||| |||
Sbjct 30845 CAGATCTTCGTCAAGACATTGACCGGAAAGACAATCACGTTAGAAGTCGAGTCTTCCGAC 30904
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| |||||||| || || || || || || ||| ||
Sbjct 30905 ACGATTGACAACGTGAAGTCCAAGATTCAGGACAAGGAGGGCATCCCACCTGACCAGCAG 30964
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || || ||||| || ||||| |||||||| || | || ||| |||||||||| |
Sbjct 30965 CGTCTCATTTTCGCTGGCAAGCAATTGGAAGACGGCCGCACCTTGAGCGATTACAACATT 31024
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
||||| || ||||| |||||||||||
Sbjct 31025 CAGAAGGAATCTACGCTTCACCTTGT 31050
Score = 87.8 bits (96), Expect = 4e-12
Identities = 137/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
||| || ||||| || || || ||||| | || || || |||||| || ||||
Sbjct 30400 CAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTTGAGTCTTCTGATACCATCGACAA 30459
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| |||||||| || || || || ||| || ||| || | ||||||||
Sbjct 30460 TGTGAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGTCTTATCTT 30519
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
|||||| ||||| | || || || | ||| || |||| |||||| | ||||| |||||
Sbjct 30520 CGCCGGCAAGCAACTTGAGGACGGTCGCACTCTGTCCGACTACAACATTCAGAAGGAGTC 30579
Query 206364 TACTCTTCACCTTGTT 206379
||| || ||| | |||
Sbjct 30580 TACGCTCCACTTGGTT 30595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181815939392641
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |