Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016 -10-21] 321 sequences; 48,556,462 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq179 89.7 7e-13 >seq179 Length=397792 Score = 89.7 bits (98), Expect = 7e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 39609 ACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAA 39668 ||| || |||||| |||||| || |||||||| || | | || | ||||| || | Sbjct 380981 ACAATAGGCAGGCAAAGTCAGTGTGCAGGCCCTCGTCGCGAGAGATGAGCTCGTTGGAGA 380922 Query 39669 ATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAG 39728 | || || |||||||| ||||||||||| |||||||| || |||| || || | || Sbjct 380921 AGGTCAGACCAGGCATGAGACCACGCTTCTTGAGCCAGAAAATGGAGGCGAACGCACCGC 380862 Query 39729 AAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAG 39765 |||||||| || || || || || || ||||| || Sbjct 380861 TGAAGAAGATACCCTCAACAGCGGCGAAGGCAACCAG 380825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686906043778440