Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20orchidophilum_20[genbank_20GCA_5F001831195.1_202016
-10-21] 321 sequences; 48,556,462 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq49 172 7e-38
seq179 125 9e-24
seq290 100 4e-16
>seq49
Length=112291
Score = 172 bits (190), Expect = 7e-38
Identities = 1082/1723 (63%), Gaps = 49/1723 (3%)
Strand=Plus/Plus
Query 117805 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 117864
||||||||||||| || |||| | || ||||||||||| ||||||||||| |
Sbjct 49599 TGAACTGAATGGGGGCCGAAGCTGCCTGGGTACGCAGGTAGTACATGCCCGTCTTGAGAC 49658
Query 117865 CCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGA 117924
| |||||||| || | ||||| || | ||| | ||| ||| | ||||
Sbjct 49659 CAAGCTTCCAGCCAGCAAAGTGCATGCTGGTAATTTTGCCCATGGTAGGATCCTTCATGT 49718
Query 117925 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCA 117984
|| ||| | || || || ||||||||| || || || || ||||| | ||
Sbjct 49719 GGATGTTGAGGGACTGTGACTGGTCGATGAAGGCACCGCGGTCGGCAGCCATCTG---CA 49775
Query 117985 CATCCTTCATCTTG---ATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGA 118041
|| | | || | |||||||| || ||| |||| || ||| | || | || |
Sbjct 49776 CAACGGTACGCTGGGAGATTTCCCAGACGGTCTTGTACAGAGCCTTTACCTCGGCAGGAA 49835
Query 118042 TATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGA---TCCTTCATATCCT 118098
| | ||| || |||| ||| ||| || | | |||| | | |||||| | |
Sbjct 49836 TGTTGGGGATGTTCTGGACGGA---ACCGTTCTCGGCGATGATACGGTTCTTCATGGCAT 49892
Query 118099 TTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACT 118158
||||| | || || | |||||| | || || ||||| || ||||
Sbjct 49893 CAGACCACAAGCCCATGTCGACGAGATCTTTCAACAGCCAGGGGTTGACGACTTGGAACT 49952
Query 118159 CACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGT 118218
| || || || || | | | || || |||| ||| || || || |||||||| ||||
Sbjct 49953 CTCCAGCAAGAACACGACGCTGGTAAATGTTGGACGTATAGGGTTCGAAGCACTCGTTGT 50012
Query 118219 TACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGA 118278
| ||||| || || | |||||||| || |||||||| || | ||| || ||||| ||||
Sbjct 50013 TGCCCAAAATCTGCGAAGTGGAGGCAGTAGGCATGGGAGCAACGAGCAGACTGTTGCGGA 50072
Query 118279 GACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCTC 118336
||| | ||| | || | ||||| |||| |||||| || | | | || | ||
Sbjct 50073 CACCATGCTCCTTGATCTGCTCCTTCAGAGAGTCCCAATCCCAAAGGTCAGAG--GGCTT 50130
Query 118337 CCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTC 118396
| | |||||| || |||||||||| || || || || || ||||| | ||
Sbjct 50131 GACATTCCACATGTCGTACTGGAGGATGCCCTGAGAAATAGGAGAGCCCTCGTACGTGGA 50190
Query 118397 ATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCG--AGGGCTGCGTGATACATT 118454
|| | || || ||| ||||| | || | | | | || || || || || ||
Sbjct 50191 GTAGGTACCTTCCTCCTTGGCCAACT--GAACCGACATAGTCAGAGCAGCATGGTAAATG 50248
Query 118455 GTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCAC 118514
|| ||||| || || | | |||||| || || || | | ||
Sbjct 50249 GTCTCAAAGATCTTCTTGTTGAGGTCACGGGCCTCAGGAGATTCGAATGGCATGCGAAGG 50308
Query 118515 AAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTA 118574
| || |||| || ||||| |||||||| || || || || || || | ||| ||
Sbjct 50309 GCGAGGAAAGCATCGGCAAGACCCTGGACACCAAGACCGATGGGACGGTGACGCATGTTG 50368
Query 118575 GACTTCCGAGCGGTCTCC---ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTT 118631
|| || || ||| ||||| || || ||| || | | | || | ||
Sbjct 50369 CTATTGCGGGC---CTCAGGAACGGGGTAGTGGTTGACATCAATGATCTTGTTCAAGTTG 50425
Query 118632 TTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCA 118691
||| |||| |||| ||||||||||| | | | || | | | ||| |
Sbjct 50426 CGAACGACGACCTGAGTGACCTCATGAAGCTTCTGGAAGTCGTA---GACACCCTCGTTG 50482
Query 118692 TTGACAT---ACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 118748
| | || | |||||||||||| || |||| || || |||| | ||||||
Sbjct 50483 TAGTCAACGAAAGTAGGAAGGGCGAGAGAAGCCAAGTTGCAGACAGCGACCTCATCAGGG 50542
Query 118749 TCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTT 118808
| |||||| || || || ||||| | ||| || || |||||||| | ||||||
Sbjct 50543 GCGCAGTACTCAATGATCTCAGTGCAGAGGTTGGAGCTGCGGATGGTGCCGAGGTTCTTC 50602
Query 118809 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 118868
|| || ||| ||| |||||||||||||||||| | || | || ||||| ||
Sbjct 50603 TGGTTGCTCTTGCGGTTTGCGGCATCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCAGTC 50662
Query 118869 TGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGC-- 118925
|| | || |||||| || | ||| | | || | || | ||| ||| | |
Sbjct 50663 TGAGCCTCGAGAATTGCGTACCAAAGCTTCTGGGCCTTGA----TGGTCTTGCGACCCTT 50718
Query 118926 -CCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAG 118984
||||| ||||||||| ||| | ||| || ||||| || || | || | ||
Sbjct 50719 GCCCTCCCGCTCGTACTTCTCGTACAAGGCCTCGAACTCCTCGCCGTAGCAGTCAGCCAG 50778
Query 118985 CCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCAT 119044
|| || || || || || | ||| | ||| | | | || ||| || | ||||||
Sbjct 50779 ACCGGGGCACTCATTGGGACACATGAGGGTCCAGTCAGCGTTCTTCTCGACTCTCTTCAT 50838
Query 119045 GAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCC 119104
||| || || ||||||||||| || ||| || || ||| || | || || | ||
Sbjct 50839 GAATAGATCGGGGATCCAGAGGGCAAGGAAAAGGTCGCGAGCACGGACCTCCTCCTTGCC 50898
Query 119105 CTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACAC 119164
|| || |||| |||| || || | || ||| |||||||| || || ||||| |
Sbjct 50899 GTGGTTCTTGCGCAGATCCATGAACTCAAAGACATCGGCGTGCCAGGGCTCAAGGTAAAT 50958
Query 119165 CGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAA 119221
|||| | || ||| | |||| | || | || || | || ||| || ||
Sbjct 50959 GGCGAAGGCACCAGGACGCTTATTACCACCTTGATCGACGTAGCGAGCCGTGTTATTGAA 51018
Query 119222 TACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTT 119281
||||||||||| || |||| || | || ||| || || || |||| ||
Sbjct 51019 GACACGAAGCATGGGGATGACTCCGTTCGAGGTGCCGTTGGTGCCGGCAATATAGGAGCC 51078
Query 119282 ATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGC 119341
| |||| | || |||| || | |||||| || || ||| ||| ||||| ||
Sbjct 51079 AGTGGCACGGATGCGGTGGGCGTTGAGACCAATGCCACCGGCCATCTTGGAGATCATGGC 51138
Query 119342 GCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAA 119401
||| | |||| || ||||||| || || || ||||| |||| | ||| ||||||
Sbjct 51139 GCAGGTCTTGAGCGTGTCGTAGATACCCTCAATGGAGTCTTCCTTCATGTCGACGAGGAA 51198
Query 119402 GCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGA 119460
||| |||| || | ||| || ||||| ||||||||||| || || | ||||||
Sbjct 51199 GCAAGAAGACAGCTG-GCACTGAGGGGTACCGGCGTTGAAGAGTGTGGGAGAGGCGTGGG 51257
Query 119461 TGAACATACCTTG--GGACATCTTGTCGTAGGTCTCCAAGACG 119501
||| | | |||| ||||||| || ||||||||| | ||||
Sbjct 51258 TGA--AGAACTTGCTGGACATCAAGTTGTAGGTCTCGATGACG 51298
>seq179
Length=397792
Score = 125 bits (138), Expect = 9e-24
Identities = 303/453 (67%), Gaps = 8/453 (2%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| |||| ||||||||||||||||| ||||| ||| | | | || ||||||||
Sbjct 381258 TAGTCGGCAACACGCTTCTCGAAGAAGTTGGTCTTTCCGCCGAGGGAAATGTTCTCCATG 381199
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGCACT-CCAATCTGTTTGAGGAGACG 129846
||||| || ||||| || || | | || | | |||| | ||||||
Sbjct 381198 AAATCGAAGGGGTTGGAAGACTTGTAGACCT-TGTCGTTGCCAAGAGCGACCAAGAGACG 381140
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
|| | ||| |||||||||||| |||| | ||||||||| |||| ||| ||
Sbjct 381139 GTCAGCAACGAACTCAATGTACTGCTTCATCAAGTTGGAGTTCATGCCGAGGAGAGCGCA 381080
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966
|| || || || | |||| ||| |||||| | || || || | |||| | |
Sbjct 381079 AGGCAGAGCCTCAGTCAAGAACTCCTGCTCAATCTTGACCGCATCGACAATGATGTCCTC 381020
Query 129967 AATGGTCTCCGTGCCAGGTCTAT---TGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023
||| || | || || | | || | || | || || || |||||| ||
Sbjct 381019 AATAACCTGCTTGTTGGGGCGGTGCTTGAGGTGAGAGTACAATAGG--CA-GGCAAAGTC 380963
Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083
||| || |||||||| || |||||||| || || |||||| |||||| ||||||||
Sbjct 380962 AGTGTGCAGGCCCTCGTCGCGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAG 380903
Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143
||| |||||||| | ||||||||| | || | || ||||||||| ||||| ||
Sbjct 380902 ACCACGCTTCTTGAGCCAGAAAATGGAGGCGAACGCACCGCTGAAGAAGATACCCTCAAC 380843
Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGA 130176
| ||||| |||| ||||||| || |||||
Sbjct 380842 AGCGGCGAAGGCAACCAGACGCTGGGCGAAGGA 380810
>seq290
Length=261601
Score = 100 bits (110), Expect = 4e-16
Identities = 163/233 (70%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 14236 ACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTC 14295
||||| ||| || ||||| || ||||||| ||| || || | | | ||| ||| | |
Sbjct 140352 ACCGATGGCATCGATTTCGTCAATGAAAATGATGCAGGGGGCACTCTTACGAGCATTTGC 140411
Query 14296 AAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG--CG 14353
||| | ||||||||||| | ||||||||||||||||||||| || || | || |
Sbjct 140412 AAACAAGTCTCGCACTCTTGAAGGACCGACACCCACAAACATCTCAACGAACTCGGAACC 140471
Query 14354 GCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 14413
|| || | || ||||| || ||| || || ||| |||| ||| || ||||||
Sbjct 140472 GCTGACGCT--GAAAAAGGGCACACCAGACTCGCCGGCGGTGGCCTTGGCAAGCAGGGTC 140529
Query 14414 TTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466
|| || || ||||| || || || | |||||||| |||||| | || ||
Sbjct 140530 TTACCGGTTCCTGGAGGTCCGGCCAGGATAGCACCACGAGGGATCTTTGCGCC 140582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618432718528760
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