Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20salicis_20[genbank_20GCA_5F001563125.1_202016-02-
17] 2,776 sequences; 48,373,413 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq1058 122 2e-22
>seq1058
Length=49244
Score = 122 bits (134), Expect = 2e-22
Identities = 139/184 (76%), Gaps = 2/184 (1%)
Strand=Plus/Minus
Query 230452 GGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGT 230510
||||||||| | ||||| ||| ||||||||||| ||||| |||||||| | || ||
Sbjct 16247 GGCATGAACTCC-AACTTGATGAAGCAGTACATCGAGTTCGTTGCCGACCGTCTCTTGGT 16189
Query 230511 TGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCAT 230570
||| ||||| |||| || || ||||| ||| |||||||||| || |||||| |||
Sbjct 16188 TGCTCTTGGCAACGACAAGGTCTACAAGTCTTCCAACCCCTTTGACTTCATGGAGAACAT 16129
Query 230571 TTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGG 230630
|| ||| || |||||||||||||| || ||||| || ||||| |||| | | ||
Sbjct 16128 CTCCCTTGGCGGCAAGACCAACTTCTTTGAGAAGCGCGTTGCCGACTACCAGAAGGCCGG 16069
Query 230631 TGTG 230634
||||
Sbjct 16068 TGTG 16065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057786375844880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |