Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20salicis_20[genbank_20GCA_5F001563125.1_202016-02- 17] 2,776 sequences; 48,373,413 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1058 122 2e-22 >seq1058 Length=49244 Score = 122 bits (134), Expect = 2e-22 Identities = 139/184 (76%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 230452 GGCATGAACGCTGAACTT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGT 230510 ||||||||| | ||||| ||| ||||||||||| ||||| |||||||| | || || Sbjct 16247 GGCATGAACTCC-AACTTGATGAAGCAGTACATCGAGTTCGTTGCCGACCGTCTCTTGGT 16189 Query 230511 TGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCAT 230570 ||| ||||| |||| || || ||||| ||| |||||||||| || |||||| ||| Sbjct 16188 TGCTCTTGGCAACGACAAGGTCTACAAGTCTTCCAACCCCTTTGACTTCATGGAGAACAT 16129 Query 230571 TTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGG 230630 || ||| || |||||||||||||| || ||||| || ||||| |||| | | || Sbjct 16128 CTCCCTTGGCGGCAAGACCAACTTCTTTGAGAAGCGCGTTGCCGACTACCAGAAGGCCGG 16069 Query 230631 TGTG 230634 |||| Sbjct 16068 TGTG 16065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057786375844880