Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20salicis_20[genbank_20GCA_5F001563125.1_202016-02-
17] 2,776 sequences; 48,373,413 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1932 91.5 3e-13
>seq1932
Length=74184
Score = 91.5 bits (100), Expect = 3e-13
Identities = 121/165 (73%), Gaps = 6/165 (4%)
Strand=Plus/Minus
Query 94392 ACCTTTGCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTC 94451
||| |||||||| ||| || ||||||||||| |||| ||||| ||||| | | |||
Sbjct 58893 ACCCTTGCCTTCGCGCTCGTACTTCTCGTACAAGGCCTCGAACTCCTCGCCGTAGCAGTC 58834
Query 94452 GGAAAGGCCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---AC 94508
| ||||| |||||||||| ||| ||||| |||| || |||| | |||| ||
Sbjct 58833 AGCCAGGCCGGGGCACTCGTTGGGACACATGAGGGTCC-ATTC--GGCGTTCTTCTCGAC 58777
Query 94509 TCTCTCCATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATC 94553
||||| |||||| ||||| | | ||||| || ||||||| ||
Sbjct 58776 TCTCTTCATGAACAGATCGGGGATCCAGAGGGCGAGGAAAAGGTC 58732
Score = 84.2 bits (92), Expect = 4e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 93610 TACATGTTGGACGTTAAAGGCTCAAAGGATTCAGAGTTGCCCAGGATCTGTGCAGTGGAT 93669
|| |||||||| || | ||||| ||| | || |||||||| |||||| | ||||||
Sbjct 59630 TAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAAGATCTGGGAAGTGGAG 59571
Query 93670 GCAGTAGGCATGGGAGCAACAAACATTGAATTGTGAACACC 93710
|||||||||||||||||||||| || ||| |||||||
Sbjct 59570 GCAGTAGGCATGGGAGCAACAAGCAGACTGTTGCGAACACC 59530
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989548802971080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |