Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20salicis_20[genbank_20GCA_5F001563125.1_202016-02- 17] 2,776 sequences; 48,373,413 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1932 91.5 3e-13 >seq1932 Length=74184 Score = 91.5 bits (100), Expect = 3e-13 Identities = 121/165 (73%), Gaps = 6/165 (4%) Strand=Plus/Minus Query 94392 ACCTTTGCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTC 94451 ||| |||||||| ||| || ||||||||||| |||| ||||| ||||| | | ||| Sbjct 58893 ACCCTTGCCTTCGCGCTCGTACTTCTCGTACAAGGCCTCGAACTCCTCGCCGTAGCAGTC 58834 Query 94452 GGAAAGGCCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---AC 94508 | ||||| |||||||||| ||| ||||| |||| || |||| | |||| || Sbjct 58833 AGCCAGGCCGGGGCACTCGTTGGGACACATGAGGGTCC-ATTC--GGCGTTCTTCTCGAC 58777 Query 94509 TCTCTCCATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATC 94553 ||||| |||||| ||||| | | ||||| || ||||||| || Sbjct 58776 TCTCTTCATGAACAGATCGGGGATCCAGAGGGCGAGGAAAAGGTC 58732 Score = 84.2 bits (92), Expect = 4e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 93610 TACATGTTGGACGTTAAAGGCTCAAAGGATTCAGAGTTGCCCAGGATCTGTGCAGTGGAT 93669 || |||||||| || | ||||| ||| | || |||||||| |||||| | |||||| Sbjct 59630 TAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAAGATCTGGGAAGTGGAG 59571 Query 93670 GCAGTAGGCATGGGAGCAACAAACATTGAATTGTGAACACC 93710 |||||||||||||||||||||| || ||| ||||||| Sbjct 59570 GCAGTAGGCATGGGAGCAACAAGCAGACTGTTGCGAACACC 59530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989548802971080