Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20salicis_20[genbank_20GCA_5F001563125.1_202016-02- 17] 2,776 sequences; 48,373,413 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq682 82.4 7e-11 >seq682 Length=146227 Score = 82.4 bits (90), Expect = 7e-11 Identities = 116/163 (71%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 5327 ATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCGCTGTTTCCGAAGTTAAAC 5386 || ||||| || || | ||| |||| ||||||||||| ||| || ||| || Sbjct 29539 ATGAGCTGGGCGATGCGGTCGCCCTCGGCGACCTCAAAGTCCGTGTCGGCGTGGTTGAAG 29598 Query 5387 AGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCACGTCGATA 5446 || | ||| ||| | ||| |||||||| ||||||| ||||| |||||| |||||| Sbjct 29599 AGGAGGACCTTGACCTGGCCGCGGTAGTCGGCGTCGATGACGCCGGCGCCCGTGTCGATG 29658 Query 5447 AAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGT 5489 |||| ||| || |||||||| || || || | ||| |||| Sbjct 29659 AAGTTCTTGGAGGCGAGGCCGGAGCGGGGGGCGACGCGGCCGT 29701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447734863061120