Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20salicis_20[genbank_20GCA_5F001563125.1_202016-02- 17] 2,776 sequences; 48,373,413 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq682 118 9e-22 >seq682 Length=146227 Score = 118 bits (130), Expect = 9e-22 Identities = 130/173 (75%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640 |||||| ||| ||||| || || ||||||||| ||||| || || ||| | | Sbjct 29529 GCGCTCAATGATGAGCTGGGCGATGCGGTCGCCCTCGGCGACCTCAAAGTCCGTGTCGGC 29588 Query 5641 GAAGTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCC 5700 | |||||| || | || || | |||||||||||||||||| || ||||| ||||| Sbjct 29589 GTGGTTGAAGAGGAGGACCTTGACCTGGCCGCGGTAGTCGGCGTCGATGACGCCGGCGCC 29648 Query 5701 CACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 | ||||||||||| |||| || |||||||||||||| || |||||||||| Sbjct 29649 CGTGTCGATGAAGTTCTTGGAGGCGAGGCCGGAGCGGGGGGCGACGCGGCCGT 29701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430039850184512