Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20salicis_20[genbank_20GCA_5F001563125.1_202016-02-
17] 2,776 sequences; 48,373,413 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq1058 84.2 2e-11
>seq1058
Length=49244
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701
|| ||| ||| | || || || ||||| || || |||||||| |||| || ||||| |
Sbjct 16077 CTGGTAGTCGGCAACGCGCTTCTCAAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 16136
Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761
||| || || || || || | || ||| | |||||||| ||| | | | ||| ||
Sbjct 16137 CATGAAGTCAAAGGGGTTGGAAGACTTGTAGACCTTGTCGTTGCCAAGAGCAACCAAGAG 16196
Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAGC 119821
|| || || || ||||||||||| | ||| | | || |||||||| | | |||
Sbjct 16197 ACGGTCGGCAACGAACTCGATGTACTGCTTCATCAAGTTGGAGTTCATGCCGAGGAGAGC 16256
Query 119822 GACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTAC 119872
| || | ||| | ||| | ||| |||| ||||| | ||| || || ||
Sbjct 16257 GCAAGGCAGAGCCTCGGTTAGGAACTCCTGCTCAATCTTGACGGCATCAAC 16307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478645790414720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |