Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20salicis_20[genbank_20GCA_5F001563125.1_202016-02- 17] 2,776 sequences; 48,373,413 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1058 84.2 2e-11 >seq1058 Length=49244 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| ||| | || || || ||||| || || |||||||| |||| || ||||| | Sbjct 16077 CTGGTAGTCGGCAACGCGCTTCTCAAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 16136 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || || || || || | || ||| | |||||||| ||| | | | ||| || Sbjct 16137 CATGAAGTCAAAGGGGTTGGAAGACTTGTAGACCTTGTCGTTGCCAAGAGCAACCAAGAG 16196 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAGC 119821 || || || || ||||||||||| | ||| | | || |||||||| | | ||| Sbjct 16197 ACGGTCGGCAACGAACTCGATGTACTGCTTCATCAAGTTGGAGTTCATGCCGAGGAGAGC 16256 Query 119822 GACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTAC 119872 | || | ||| | ||| | ||| |||| ||||| | ||| || || || Sbjct 16257 GCAAGGCAGAGCCTCGGTTAGGAACTCCTGCTCAATCTTGACGGCATCAAC 16307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478645790414720