Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20salicis_20[genbank_20GCA_5F001563125.1_202016-02-
17] 2,776 sequences; 48,373,413 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1932 369 1e-96
>seq1932
Length=74184
Score = 369 bits (408), Expect = 1e-96
Identities = 1134/1729 (66%), Gaps = 46/1729 (3%)
Strand=Plus/Plus
Query 363454 CCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCG 363513
|||||||| ||| | |||||||| || | || ||| | |||||||| ||
Sbjct 58252 CCGCAGCACATGATCATGCGTGTCGCAGTCGGCATCTGGGGTGACGATGTTGAGCGCGTC 58311
Query 363514 ATTGAAACATATAAGCTTCTAAGT---GCTCGTGTATTCACGCACGCCACGCCAACAATG 363570
||||| || || || || | || || || | ||||| |||||| | || ||| |
Sbjct 58312 ATTGAGACCTACAACCTCAT--GTCCAGCAAGT-TCTTCACCCACGCCTCCCCCACACTC 58368
Query 363571 TACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGAC 363630
| ||| || || || | | | ||| ||||||| ||||| || | | ||||||||
Sbjct 58369 TTCAACGCCGGTACCCCTCAGTGCCAGCTGTCTTCATGCTTCCTCGTCGACATGAAGGAA 58428
Query 363631 GATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCA 363690
|| ||||| |||||||||| ||||| || |||| || || | || ||||||| ||
Sbjct 58429 GACTCCATTGAGGGTATCTACGACACCCTCAAGACCTGCGCCATGATCTCCAAGATGGCT 58488
Query 363691 GGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCA 363748
|| || |||||| | | || |||| | | ||||| || | | || ||| |||||
Sbjct 58489 GGTGGCATTGGTCTCAACGC-CCACCGTATCCGTGCCACTGG-CTCCTATATTGCCGGCA 58546
Query 363749 CAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGT 363808
| || ||| || || | |||||||||||||||| || |||| ||||| | |
Sbjct 58547 CCAACGGCACCTCTAACGGTGTCATTCCCATGCTTCGTGTCTTCAACAACACTGCTCGCT 58606
Query 363809 ACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATC 363868
|||||||||||||||| ||||| || || || || || || || |||||| |
Sbjct 58607 ACGTCGACCAGGGTGGCAACAAGCGTCCTGGTGCCTTCGCCATCTACCTTGAGCCTTGGC 58666
Query 363869 ATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTG 363928
| |||||| | |||||||| | || | || || ||| || || ||||| | ||||
Sbjct 58667 ACGCCGATGTCTTTGAGTTCATGGACTTGCGCAAGAACCACGGCAAGGAGGAGGTCCGTG 58726
Query 363929 CACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAG 363988
| ||||| || ||| || || ||| | | || | || |||||| | || ||| |
Sbjct 58727 CTCGTGACCTTTTCCTCGCCCTCTGGATCCCCGATCTGTTCATGAAGAGAGTCGAG--AA 58784
Query 363989 GTAAGA--ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGG 364046
| | | | ||| | ||| | || || |||| || || || || | || | ||
Sbjct 58785 GAACGCCGAATGGACCCTCATGTGTCCCAACGAGTGCCCCGGCCTGGCTGACTGCTACGG 58844
Query 364047 TGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAAT 364106
|| || | | || | ||||| ||||| || || || |||| ||| ||||| ||
Sbjct 58845 CGAGGAGTTCGAGGCCTTGTACGAGAAGTACGAGCGCGAAGGCAAGGGTCGCAAGACCAT 58904
Query 364107 TCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTA 364166
|| |||||||| |||| |||||| | || | |||| |||||| || | ||||
Sbjct 58905 CAAGGCCCAGAAGCTTTGGTACGCCATCCTCGAGGCTCAGACTGAGACCGGCAACCCCTT 58964
Query 364167 TATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCA 364226
||| | ||||| || | ||||||||| ||||||| || |||| || || || |
Sbjct 58965 CATGCTTTACAAGGACGCCGCGAACCGCAAGAGCAACCAGAAGAACCTCGGAACCATCC- 59023
Query 364227 GCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTAT 364285
|||| | || || || || ||||| ||||| ||| ||| || || ||| ||| ||||
Sbjct 59024 GCAGCTCCAATCTCTGCACTGAGATCATTGAGTACTGCGCCCCTGATGAGGTTGCTGTAT 59083
Query 364286 GTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTA------AAAGATGGTACTTTTGACC 364339
| ||| | || || | || || || | || || || || ||| | ||
Sbjct 59084 GCAACTTGGCCTCTCTTGCCCTGCCTACCTTCGTTGACTACAACGAGGGTGTCTACGATT 59143
Query 364340 ACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGACAAGGTTATCGA 364397
|||| | ||| | || || || | || | | | |||| || ||||| | || ||
Sbjct 59144 TCCAGAAGCTTCACGAGGTCACTCAGGTCGTTGTCC--GCAACCTGAACAAGATCATTGA 59201
Query 364398 CAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCGTCATCGCCCG 364452
|| | || || ||||||| || || ||| || |||||||| || ||
Sbjct 59202 TGTCAACCACTACCCCGTTCCTGAGGCTCGCAACAGC-----AACATGCGTCACCGTCCC 59256
Query 364453 ATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAG--ATGGCATTTG 364510
|| || |||||||| ||||| || ||||| | || | ||| | | ||| | || |
Sbjct 59257 ATCGGCCTTGGTGTCCAGGGTCTTGCTGATGCCTTCCT--TGCCCTACGCATGCCTTTCG 59314
Query 364511 ATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAA 364570
| || ||||| ||||| | ||| || ||| |||| || || || || || || ||
Sbjct 59315 AGTCTCCTGAGGCTCGCGATCTCAACAAGAAGATTTTCGAGACCATCTACCACGCTGCTC 59374
Query 364571 TGAC--TGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTC 364628
|||| || | ||| | | |||| | |||| | ||||| || || ||||| ||
Sbjct 59375 TGACCATG-TCCGT-TCAACTGGCCAGGGAGGAGGGTACCTACTCCACGTACGAGGGCTC 59432
Query 364629 CCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATG 364688
|||| | || ||||| | | |||| || | |||||||||| ||| |||| || ||
Sbjct 59433 CCCTATCTCCCAGGGTATCCTTCAGTACGACATGTGGAATGTCAAGCCCTCTGACCTCTG 59492
Query 364689 GAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTA 364747
| ||||||| | || | | || | ||| | || ||| ||||||| || ||
Sbjct 59493 GGACTGGGACTCTCTGAAGGAGCAGA-TCAAGGAACACGGTGTTCGCAACAGTCTGCTTG 59551
Query 364748 CAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAAC 364807
|| |||||||| || || || ||| | |||||| | || ||||||||||||||||| |
Sbjct 59552 TTGCTCCCATGCCTACTGCCTCCACTTCCCAGATCTTGGGCAACAACGAGTGCTTCGAGC 59611
Query 364808 CGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATA 364867
| | || ||| | || ||||| |||||| |||| || || | ||| || ||
Sbjct 59612 CCTACACTTCCAACATCTACCAGCGCCGTGTTCTTGCCGGCGAGTTCCAGGTTGTCAACC 59671
Query 364868 AGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATA 364927
| || | |||||||| |||| || | ||| || |||||||||| ||
Sbjct 59672 CCTGGCTGCTTAAGGATCTCGTCGACATGGGCTTATGGTCCGATGCCATGAAGAACCGTA 59731
Query 364928 TCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTA 364987
|||| |||| |||||||| || |||||||| || |||| | || | ||| ||
Sbjct 59732 TCATTGCCGAGAATGGTTCCGTTCAGAACATCCCCAACATTCCCGCCGAGGTCAAGGCTC 59791
Query 364988 TTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCG 365047
| ||||| ||||| |||||||| ||| ||| || | | | ||||| |||||||| |
Sbjct 59792 TGTACAAGACCGTCTGGGAAATCTCCCAGCGCACCGTTGTCCAGATGGCTGCCGATCGTG 59851
Query 365048 GTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCA 365107
|||| || ||| ||| |||||| | ||| | ||||| | || || | ||
Sbjct 59852 GTGCCTTCATCGACCAGTCCCAGTCCCTCAACATCCACATGAAGGACCCGACAATGGGCA 59911
Query 365108 AGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
|| | || |||||||||| || ||||| ||||| ||||| ||
Sbjct 59912 AGATCACCAGCATGCATTTCGCTGGCTGGAAGCTTGGTCTCAAGACGGG 59960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303307242970832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |