Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20salicis_20[genbank_20GCA_5F001563125.1_202016-02-
17] 2,776 sequences; 48,373,413 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq1741 84.2 2e-11
>seq1741
Length=26822
Score = 84.2 bits (92), Expect = 2e-11
Identities = 111/154 (72%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 24034 TCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAG 24093
|||| |||||| || || |||||||| | ||||| |||||| ||||| || |
Sbjct 16500 TCGAGGTCGAGTCCTCTGATACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGG 16559
Query 24094 GCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA 24153
|||| || |||||||| ||| | || |||| || ||||||||||| || || | | | |
Sbjct 16560 GCATCCCCCCCGATCAGCAGCGTCTCATTTTCGCTGGCAAGCAACTTGAGGACGGCCGCA 16619
Query 24154 ACGTCAGCGATTATAACATTCAAAAAGAATCTAC 24187
| || ||| || ||||| || || || |||||
Sbjct 16620 CCCTCTCCGACTACAACATCCAGAAGGAGTCTAC 16653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429921454190280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |