Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20salicis_20[genbank_20GCA_5F001563125.1_202016-02-
17] 2,776 sequences; 48,373,413 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq1058 93.3 9e-14
>seq1058
Length=49244
Score = 93.3 bits (102), Expect = 9e-14
Identities = 138/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 243530 AGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGG 243589
|||| ||| | ||| ||| | || ||| || | ||||||||||| | | |||
Sbjct 16285 AGGAGTTCCTAACCGAGGCTCTGCCTTGCGCTCTCCTCGGCATGAACTCCAACTTGATGA 16226
Query 243590 GACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGT 243649
||||||||||| ||||| |||||||| | || | || ||||| | || || || |
Sbjct 16225 AGCAGTACATCGAGTTCGTTGCCGACCGTCTCTTGGTTGCTCTTGGCAACGACAAGGTCT 16166
Query 243650 ACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACT 243709
|||| || |||||||||| ||| |||||| ||| || ||| || || || ||||
Sbjct 16165 ACAAGTCTTCCAACCCCTTTGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACT 16106
Query 243710 TCTTCGAAAAGCGTGT 243725
|||| || ||||| ||
Sbjct 16105 TCTTTGAGAAGCGCGT 16090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102840773315600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |