Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20salicis_20[genbank_20GCA_5F001563125.1_202016-02-
17] 2,776 sequences; 48,373,413 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq1932 206 3e-48
seq1058 132 6e-26
>seq1932
Length=74184
Score = 206 bits (228), Expect = 3e-48
Identities = 1147/1820 (63%), Gaps = 63/1820 (3%)
Strand=Plus/Minus
Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656
|| ||||||||||| ||||||||||| || |||||||| || | |||||| ||
Sbjct 59975 CGCAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAGCCAGCGAAATGCATGCTGGTG 59916
Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716
| |||| | ||| || | |||| || ||| | ||||| || |||||||||
Sbjct 59915 ATCTTGCCCATTGTCGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGGTCGATGAAG 59856
Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 113773
|||||||| || ||||| | | || | | || | |||||||| || ||
Sbjct 59855 GCACCACGATCGGCAGCCATCTGGA---CAACGGTGCGCTGGGAGATTTCCCAGACGGTC 59799
Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833
|||| || ||| | || | || || | ||| || || | ||| ||| | |
Sbjct 59798 TTGTACAGAGCCTTGACCTCGGCGGGAATGTTGGGGATGTTCTGAACGGAACCATTCTC- 59740
Query 113834 TTGACCATGAGA---TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCC 113890
| | |||| | | |||||| | | ||||| | || || | ||||||||
Sbjct 59739 --GGCAATGATACGGTTCTTCATGGCATCGGACCATAAGCCCATGTCGACGAGATCCTTA 59682
Query 113891 ACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTG 113950
| || |||||||| ||||| || || || || | | | ||||| |||
Sbjct 59681 AGCAGCCAGGGGTTGACAACCTGGAACTCGCCGGCAAGAACACGGCGCTGGTAGATGTTG 59622
Query 113951 GTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGC 114010
| ||||| ||||| |||||||| ||||| |||||||| |||| |||||||| || |||
Sbjct 59621 GAAGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAAGATCTGGGAAGTGGAGGCAGTAGGC 59562
Query 114011 ATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCG 114070
||||| || | || || ||||| || | ||| | |||| | || | ||||| || | |
Sbjct 59561 ATGGGAGCAACAAGCAGACTGTTGCGAACACCGTGTTCCTTGATCTGCTCCTTCAGAGAG 59502
Query 114071 TCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 114130
|||||||| || | | || | | |||||| || |||| |||||||| |||
Sbjct 59501 TCCCAGTCCCAGAGGTCAGAGGGCTTGACATTCCACATGTCGTACTGAAGGATACCCTGG 59442
Query 114131 GAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATT---CGGAG 114187
||| || || ||||| | || ||| | ||||| || |||| || ||||
Sbjct 59441 GAGATAGGGGAGCCCTCGTACGTGGAGTAGGTACCCTCCTCCCTGGCCAGTTGAACGGAC 59382
Query 114188 CTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCC 114247
| | | || || ||||| || || ||||| ||||| || | | |||
Sbjct 59381 ATGGTC---AGAGCAGCGTGGTAGATGGTCTCGAAAATCTTCTTGTTGAGATCGCGAGCC 59325
Query 114248 TCGTCGGAATC-AAACGC--GAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACA 114304
|| || || ||| || | || || || || |||| || ||||| ||||||
Sbjct 59324 TCAGGAGACTCGAAAGGCATGCGTAGGGC---AAGGAAGGCATCAGCAAGACCCTGGACA 59268
Query 114305 CCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC---ACGGGATAA 114361
|| ||||| || || || || | ||| || || ||||| ||| ||||| ||
Sbjct 59267 CCAAGGCCGATGGGACGGTGACGCATGTTGCTGTTGCGAGC---CTCAGGAACGGGGTAG 59211
Query 114362 AAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGC 114421
|| ||| || | | | || || || | || |||| |||| || ||||||
Sbjct 59210 TGGTTGACATCAATGATCTTGTTCAGGTTGCGGACAACGACCTGAGTGACCTCGTGAAGC 59151
Query 114422 TTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACAT---ACTTAGGAAGGGCGATTGAC 114478
|| | | |||| | | | ||| | | | || | |||| ||||| | ||
Sbjct 59150 TTCTGGAAATCGTA---GACACCCTCGTTGTAGTCAACGAAGGTAGGCAGGGCAAGAGAG 59094
Query 114479 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAA 114538
|||| || || |||| |||||| | |||||| || || || || || | |
Sbjct 59093 GCCAAGTTGCATACAGCAACCTCATCAGGGGCGCAGTACTCAATGATCTCAGTGCAGAGA 59034
Query 114539 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 114598
|| || || ||||| || | |||||| || || ||| ||| || ||||||
Sbjct 59033 TTGGAGCTGCGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTCGCGGCGTCCTTG 58974
Query 114599 TAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATC 114657
||||||||| | || | || ||||| || || | || ||| || || | ||| | | ||
Sbjct 58973 TAAAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCCTCGAGGATGGCGTACCAAAGCTTC 58914
Query 114658 GGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT---CCTC---CTCGTACTTTGTGTAGAG 114711
| | || | ||| ||| || |||| | || ||||||||| ||| |
Sbjct 58913 TGGGCCTTGA----TGGTCTTG---CGACCCTTGCCTTCGCGCTCGTACTTCTCGTACAA 58861
Query 114712 GGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAG 114771
||| || ||||| || || | || | || || || || | || || | |||
Sbjct 58860 GGCCTCGAACTCCTCGCCGTAGCAGTCAGCCAGGCCGGGGCACTCGTTGGGACACATGAG 58801
Query 114772 AGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGA 114831
| ||||| | || ||| || | ||||||||| || || ||||||||||| ||
Sbjct 58800 GGTCCATTCGGCGTTCTTCTCGACTCTCTTCATGAACAGATCGGGGATCCAGAGGGCGAG 58741
Query 114832 GAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTC 114891
||| || || ||| || | || || | || || || ||||| |||| || ||
Sbjct 58740 GAAAAGGTCACGAGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAAGTCCATGAACTC 58681
Query 114892 CATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA----- 114946
| || ||| |||||||| || || ||||| | |||| | || | ||||
Sbjct 58680 AAAGACATCGGCGTGCCAAGGCTCAAGGTAGATGGCGAAGGCACC---AGGACGCTTGTT 58624
Query 114947 -CCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACC 115005
||| |||||| || || | || ||| || || || |||||||| ||||||| |||
Sbjct 58623 GCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACACGAAGCATGGGAATGACACC 58564
Query 115006 ATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTG 115065
| ||| ||| || || || |||| || | |||| | || | ||| ||
Sbjct 58563 GTTAGAGGTGCCGTTGGTGCCGGCAATATAGGAGCCAGTGGCACGGATACGGTGGGCGTT 58504
Query 115066 CATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGAT 115125
| |||||| || || ||| ||| ||||| ||||| | |||| || |||||||
Sbjct 58503 GAGACCAATGCCACCAGCCATCTTGGAGATCATGGCGCAGGTCTTGAGGGTGTCGTAGAT 58444
Query 115126 CCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGG 115185
|| || || ||||| |||| | ||| |||||||| |||| || | ||
Sbjct 58443 ACCCTCAATGGAGTCTTCCTTCATGTCGACGAGGAAGCATGAAGACAGCTGGCACTGAGG 58384
Query 115186 TGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTA 115243
||||| ||||||||||| || || | |||||| ||| | | |||| ||||||
Sbjct 58383 GGTACCGGCGTTGAAGAGTGTGGGGGAGGCGTGGGTGA--AGAACTTGCTGGACATGAGG 58326
Query 115244 TCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATA 115303
| ||||||||| | |||| || || || || || |||| | ||| |||||
Sbjct 58325 TTGTAGGTCTCAATGACGCGCTCAACATCGTCACCCCAGATGCCGACTGCGACACGCATG 58266
Query 115304 AACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCC 115363
| ||||| || ||| | || | | || |||||| || | ||||| |||||
Sbjct 58265 ATCATGTGCTGCGGTCTCTCGGCAATCTTGCCGTCGAGCTTCAGCAGGTATGATCTCTCC 58206
Query 115364 AAGGTCTTGAGACCAAAATA 115383
| ||| |||| ||| || ||
Sbjct 58205 AGGGTTTTGAAACCGAAGTA 58186
>seq1058
Length=49244
Score = 132 bits (146), Expect = 6e-26
Identities = 307/459 (67%), Gaps = 18/459 (4%)
Strand=Plus/Plus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
|||||| |||| |||||||| |||||||| ||||| ||| | | | ||| ||||||||
Sbjct 16080 GTAGTCGGCAACGCGCTTCTCAAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCAT 16139
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCC-CAATCTGTTTGAG 125871
|| ||||| ||||| || || | | | |||| || ||| | |
Sbjct 16140 GAAGTCAAAGGGGTTGGAAGACTTGTAGACCTTGTCGTTGCCAAGAGCAACC------AA 16193
Query 125872 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 125931
|||||| || | ||| |||| ||||||| |||| | |||||||| |||| |||
Sbjct 16194 GAGACGGTCGGCAACGAACTCGATGTACTGCTTCATCAAGTTGGAGTTCATGCCGAGGAG 16253
Query 125932 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGAT 125991
|| || || || || | |||| ||| |||||| | ||||| || | ||
Sbjct 16254 AGCGCAAGGCAGAGCCTCGGTTAGGAACTCCTGCTCAATCTTGACGGCATCAACGATAAT 16313
Query 125992 GGCGTGAATGGTGTCCACCCCAGGTCTAT---TGCGCAAAGTCTTGAAGAGTTCCACGGC 126048
| | | |||| | | | ||| | | || | || | ||||| || |||
Sbjct 16314 GTCCTCAATGACCTGCTTGCTAGGGCGGTGCTTGAGGTGAGAGTACAAGAGG--CA-GGC 16370
Query 126049 AAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGG 126108
||| || |||||||||||| |||||||||||||| || || |||||| ||| || ||
Sbjct 16371 AAAGTCGGTGTGGAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTCAGACCGGG 16430
Query 126109 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCC 126168
||||||||| |||||||| | |||||| || | || | ||| ||||||||| ||
Sbjct 16431 CATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCGCTGAAGAAGATACC 16490
Query 126169 CTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGA 126207
||| ||| ||||| |||| || |||| || |||||
Sbjct 16491 CTCGACAGCGGCGAAGGCAACCAGCCGCTGGGCGAAGGA 16529
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597332871830080
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