Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20salicis_20[genbank_20GCA_5F001563125.1_202016-02- 17] 2,776 sequences; 48,373,413 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1932 196 6e-45 >seq1932 Length=74184 Score = 196 bits (216), Expect = 6e-45 Identities = 1076/1701 (63%), Gaps = 59/1701 (3%) Strand=Plus/Minus Query 109399 GCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGC 109458 |||| || || || || ||||| ||||| ||||||||| |||||| | | |||| Sbjct 59984 GCCTGCGTACGCAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAGCCAGCGAAATGC 59925 Query 109459 ATTGAAGAGAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGA 109518 || | || ||| | |||||| || ||| | ||| | ||||| ||||| Sbjct 59924 ATGCTGGTGATCTTGCCCATTGTCGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGG 59865 Query 109519 TCGATGAATCGACCACGATCAGCCGCCATGTCGATGA---TACACTTTTGGCTAATTTCC 109575 |||||||| ||||||||| || ||||| | || | | | || || |||||| Sbjct 59864 TCGATGAAGGCACCACGATCGGCAGCCATCTGGACAACGGTGCGCT---GGGAGATTTCC 59808 Query 109576 CAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAG 109635 ||||| |||||||||| | ||||| || ||||||||| |||||| |||| || Sbjct 59807 CAGACGGTCTTGTACAGAGCCTTGACCTCGGCGGGAATGTTGGGGATGTTCTGAACGGA- 59749 Query 109636 CCACCAGCCTTCACCATGAGA---TCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTG 109692 |||| || | |||| | | |||||| | | ||||| | || | | | Sbjct 59748 --ACCATTCTCGGCAATGATACGGTTCTTCATGGCATCGGACCATAAGCCCATGTCGACG 59691 Query 109693 AGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGG 109752 ||||| | || || |||||| || || || || ||||| || || || Sbjct 59690 AGATCCTTAAGCAGCCAGGGGTTGACAACCTGGAACTCGCCGGCAAGAACACGGCGCTGG 59631 Query 109753 TAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAA 109812 |||||||| | |||||||| ||||| ||||| |||||||| | ||| || | |||||| Sbjct 59630 TAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAAGATCTGGGAAGTGGAG 59571 Query 109813 GCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCA 109872 || || ||||||||||| | || |||||||| || | ||| | ||| | | |||| Sbjct 59570 GCAGTAGGCATGGGAGCAACAAGCAGACTGTTGCGAACACCGTGTTCCTTGATCTGCTCC 59511 Query 109873 CGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACATATCTGGT 109932 || | |||||| || | | || | || ||| |||||| || Sbjct 59510 TTCAGAGAGTCCCAGTCCCAGAGGTCAGAG------GGCTTGACATTCCACATGTCGTAC 59457 Query 109933 TGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCTCAACCTCG 109992 ||||| | ||||| | ||| || |||| | | | ||| | ||||| || | Sbjct 59456 TGAAGGATACCCTGGGAGATAGGGGAGCCCTCGTACGTGGAGTAGGTACCCTCCTCCCTG 59397 Query 109993 GCCAACT---CGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATATGAGCA 110049 |||| | |||| | | || || || || || || ||||| ||||| | Sbjct 59396 GCCAGTTGAACGGACATGGTC---AGAGCAGCGTGGTAGATGGTCTCGAAAATCTTC--- 59343 Query 110050 TTCATGAG---GCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACATCC 110106 || |||| ||||| ||| | | ||||| || | | || || |||| Sbjct 59342 TTGTTGAGATCGCGAGCCTCAGGAGACTCGAAAGGCATGCGTAGGGCAAGGAAGGCATCA 59283 Query 110107 GCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAGTT 110166 || |||||||| ||||| || || ||||| || || |||||| | ||||| Sbjct 59282 GCAAGACCCTGGACACCAAGGCCGATGGGACGGTGACGCATGTTGCTGTTGCGAGCCTCA 59223 Query 110167 TCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCGTG 110226 |||||||| |||| || |||| | || || || || || ||| Sbjct 59222 GGAACGGGGTAGTGGTTGACATCAATGATCTTGTTCAGGTTGCGGACAACGACCTGAGTG 59163 Query 110227 ATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACAT---ATTTGGGG 110283 | || || || || | | ||||| | | | ||| || | | || | | || Sbjct 59162 ACCTCGTGAAGCTTCTGGAAATCGTA-GACACC--CTCGTTGTAGTCAACGAAGGTAGGC 59106 Query 110284 AGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATT 110343 || |||| ||| || | ||||| |||| | ||| || | || ||| || | || Sbjct 59105 AGGGCAAGAGAGGCCAAGTTGCATACAGCAACCTCATCAGGGGCGCAGTACTCAATGATC 59046 Query 110344 TCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTG 110403 || || || | ||||| || ||| || | ||||||||| || ||| ||| Sbjct 59045 TCAGTGCAGAGATTGGAGCTGCGGATGGTTCCGAGGTTCTTCTGGTTGCTCTTGCGGTTC 58986 Query 110404 CATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCC 110463 || ||||| || |||||| | ||| | || || || ||||| | || ||| ||||| Sbjct 58985 GCGGCGTCCTTGTAAAGCATGAAGGGGTTGCCGGTCTCAGTCTGAGCCTCGAGGATGGCG 58926 Query 110464 TTCCATA-CATCGGCGGCGGGGACAGT--TGCGTTAGCGAGACCTTCCTCCTCGTACTTG 110520 | ||| | | || | ||| || || |||| | | ||||| ||||||||| Sbjct 58925 TACCAAAGCTTCTG-GGCCTTGATGGTCTTGCG--ACCCTTGCCTTCGCGCTCGTACTTC 58869 Query 110521 GTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGA 110580 ||||||| |||| || |||| ||||| |||| || || || || |||| Sbjct 58868 TCGTACAAGGCCTCGAACTCCTCGCCGTAGCAGTCAGCCAGGCCGGGGCACTCGTTGGGA 58809 Query 110581 CAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCAC 110640 || | ||||| ||| | | || ||| || |||||||||||||| || || ||||| Sbjct 58808 CACATGAGGGTCCATTCGGCGTTCTTCTCGACTCTCTTCATGAACAGATCGGGGATCCAG 58749 Query 110641 ATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCC 110700 | || |||||||||||| ||| |||| || | || ||||| ||| | ||| Sbjct 58748 AGGGCGAGGAAAAGGTCACGAGCACGGACCTCCTCCTTGCCGTGGTTCTTGCGCAAGTCC 58689 Query 110701 AAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGA 110760 | || || | || ||| | |||||| || || || |||| |||| || || | || Sbjct 58688 ATGAACTCAAAGACATCGGCGTGCCAAGGCTCAAGGTAGATGGCGAAGGCACC---AGGA 58632 Query 110761 CG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGA 110814 || || |||||| || ||||| || ||| |||||||| | ||||| ||| Sbjct 58631 CGCTTGTTGCCACCCTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACACGAAGCATGGGA 58572 Query 110815 ATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCG 110874 || | || | || || || || || ||| ||| | ||||||| || | Sbjct 58571 ATGACACCGTTAGAGGTGCCGTTGGTGCCGGCAATATAGGAGCCAGTGGCACGGATACGG 58512 Query 110875 TGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGT 110933 ||| | | |||||| ||||| ||| ||| || || || ||| |||| || Sbjct 58511 TGGGCGTTGAGACCAATGCCACCAGCCATCTTGGAGATCATGGCGCAGGTCT-TGAGGGT 58453 Query 110934 ACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTG 110993 | || ||||| ||||| || ||| |||| || | | || ||||| ||||||| ||| Sbjct 58452 GTCGTAGATACCCTCAATGGAGTCTTCCTTCATGTCGACGAGGAAGCATGAAGACAGCTG 58393 Query 110994 AGGAC-GAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG-- 111050 | || |||| || || || ||||||||||| || | || || ||| ||| |||| Sbjct 58392 -GCACTGAGGGGTACCGGCGTTGAAGAGTGTGGGGGAGGCGTGGGTGA--AGAACTTGCT 58336 Query 111051 GGACATCTTGTTGTATGTGTC 111071 |||||| |||||| || || Sbjct 58335 GGACATGAGGTTGTAGGTCTC 58315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588955562532800