Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20salicis_20[genbank_20GCA_5F001563125.1_202016-02- 17] 2,776 sequences; 48,373,413 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1741 95.1 1e-14 >seq1741 Length=26822 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| || || || || || || || || || ||||| |||| | || | | | Sbjct 16958 ACGGAGAACCAAGTGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGGCC 16899 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | |||||| || ||||| ||||||||||| || || || |||||||| || || Sbjct 16898 ATCCTCAAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCTT 16839 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || ||||| || || ||| | || | || ||||| | || || ||||| |||| Sbjct 16838 GTCCTGAATCTTCGACTTGACATTGTCGATGGTATCAGAAGACTCGACCTCAAGGGTGAT 16779 Query 101434 CGTTTTGCCGGT 101445 || ||||| || Sbjct 16778 GGTCTTGCCAGT 16767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396264992911032