Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20salicis_20[genbank_20GCA_5F001563125.1_202016-02- 17] 2,776 sequences; 48,373,413 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1741 84.2 5e-11 >seq1741 Length=26822 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || || |||||||| || || || ||||| | || Sbjct 16986 AAGACTCTTACTGGCAAGACAATTACTTTGGAGGTCGAGTCATCAGACACGATTGACAAC 17045 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || ||| || ||| || | ||||||||| Sbjct 17046 GTGAAGTCCAAGATCCAGGATAAGGAGGGTATTCCTCCCGACCAGCAGCGTCTTATCTTC 17105 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || ||||||||| |||||||||| | || || ||| |||||| ||||||| || || Sbjct 17106 GCTGGAAAGCAGCTGGAAGATGGTCGCACCCTGAGCGACTACAACATCCAGAAGGAATCC 17165 Query 206365 ACTCTTCACCTTGT 206378 || ||||| || || Sbjct 17166 ACCCTTCATCTCGT 17179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181778765588696