Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20salicis_20[genbank_20GCA_5F001563125.1_202016-02- 17] 2,776 sequences; 48,373,413 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1741 100 2e-16 >seq1741 Length=26822 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059 || || || || || |||||| | || || ||||| || || | || || | || || Sbjct 16755 GTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTCGAGTCTTCTGATACCATCGAC 16814 Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119 | ||||| || ||||| ||||| || ||||| || || || || |||||||| || Sbjct 16815 AATGTCAAGTCGAAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGTTTGATC 16874 Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179 | || ||||| ||| | || || | ||| | ||||| ||||||||||| |||||| Sbjct 16875 TTTGCTGGCAAGCAACTTGAGGATGGCCGCACCCTATCCGACTACAACATTCAGAAGGAG 16934 Query 27180 TCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || | || |||||| | ||| | || ||||| || Sbjct 16935 TCCACGCTCCACTTGGTTCTCCGTCTTCGCGGTGGTAT 16972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434903308331520