Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20simmondsii_20[genbank_20GCA_5F001563135.1_202016- 02-17] 929 sequences; 50,474,234 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq230 93.3 4e-14 >seq230 Length=716270 Score = 93.3 bits (102), Expect = 4e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 20931 TCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTC 20990 || ||||||| ||| ||||| ||||| |||| | |||| | | |||||| | Sbjct 622055 TCCACGTGGTCCGCGTAGACGTGCGCGTCGCCCATGACGTGCGTGAGGCTTCCCGGTACC 621996 Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 ||| | | | || |||| | ||||||||| ||||||||||| ||||| || || Sbjct 621995 AGGTCGCACGCCCGCGCAATCATGTGCGTCAGGAGCGCGTAGCTGGCAATGTTGAAGGGC 621936 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCA 21091 || ||||| ||||||||| ||||| |||||||| |||||| Sbjct 621935 ACGCCGAGTCCCATGTCGCAGGACCGCTGGTACAACTGGCA 621895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427771156639920