Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20simmondsii_20[genbank_20GCA_5F001563135.1_202016- 02-17] 929 sequences; 50,474,234 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq356 82.4 6e-11 >seq356 Length=254992 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || ||||||||||||| || ||| | | ||| Sbjct 84199 AGAACCAAGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCC 84258 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | ||| ||||| ||| | || | ||||| ||||| || | |||||| || || Sbjct 84259 TCAAGTTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCAGGGGGGATGCCCTCCTTATCC 84318 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | | ||| || | | | | ||| || | ||| || | ||||||||| Sbjct 84319 TGAATCTTCGACTTGACATTGTCGATAGTATCAGAAGACTCGACCTCGAGGGTGATGGTC 84378 Query 16904 TTTCCGGTCAGCGTTTTGAC 16923 || || || ||||| ||||| Sbjct 84379 TTGCCAGTGAGCGTCTTGAC 84398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405083413517710