Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20simmondsii_20[genbank_20GCA_5F001563135.1_202016- 02-17] 929 sequences; 50,474,234 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq356 109 5e-19 >seq356 Length=254992 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | || || | ||| | || || || || |||||||||||||| Sbjct 83953 ATACCACCACGCAGGCGCAGGACGAGATGCAGAGTTGACTCCTTCTGAATGTTGTAATCC 84012 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| ||| ||||| || || || ||| |||| | ||||| ||||| ||| Sbjct 84013 GACAGGGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATCAAGCGCTGCTGGTCGGGA 84072 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || || || ||||| || | | |||| |||||| | ||||| Sbjct 84073 GGAATACCCTCCTTATCTTGGATCTTCGACTTGACGTTGTCAATGGTGTCTGAAGATTCA 84132 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| |||||||| || || || || ||||||||||| Sbjct 84133 ACCTCGAGCGTAATCGTCTTGCCGGTAAGGGTCTTGACGAAAATCTGCAT 84182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420129643159548