Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20simmondsii_20[genbank_20GCA_5F001563135.1_202016-
02-17] 929 sequences; 50,474,234 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq686 98.7 2e-15
>seq686
Length=266282
Score = 98.7 bits (108), Expect = 2e-15
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 243544 GACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAA 243603
|| ||| | || ||| ||| | ||||||||||| | | ||| |||||||| ||
Sbjct 148676 GAGGCTCTGCCCTGCGCTCTTCTCGGCATGAACTCCAACTTGATGAAGCAGTACATTGAG 148617
Query 243604 TTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAAC 243663
||||| ||||||||| | | |||| ||||| | || || || ||||| || |||
Sbjct 148616 TTCGTTGCCGACCGCCTCCTGGTCGCTCTTGGCAACGACAAGGTCTACAAGTCTTCCAAC 148557
Query 243664 CCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGT 243723
||||| | ||| |||||| ||| || ||| || || || |||||||| || ||||||
Sbjct 148556 CCCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTTGAGAAGCGT 148497
Query 243724 GTCAGTGATTATCAACGCCCTGGTGTG 243750
||| ||| || || ||||||||
Sbjct 148496 GTCGCTGACTACCAGAAGGCTGGTGTG 148470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102866872626150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |