Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20simmondsii_20[genbank_20GCA_5F001563135.1_202016-
02-17] 929 sequences; 50,474,234 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq356 105 3e-17
>seq356
Length=254992
Score = 105 bits (116), Expect = 3e-17
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| || || || || || || || ||||| || || |||||||| ||
Sbjct 84182 ATGCAGATTTTCGTCAAGACCCTTACCGGCAAGACGATTACGCTCGAGGTTGAATCTTCA 84123
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | |||||| | || || || ||||||||||| || |||||||| || ||
Sbjct 84122 GACACCATTGACAACGTCAAGTCGAAGATCCAAGATAAGGAGGGTATTCCTCCCGACCAG 84063
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| || || || ||| | || || || ||||| ||||| | || || ||||||| ||
Sbjct 84062 CAGCGCTTGATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACCCTGTCGGATTACAAC 84003
Query 391230 ATTGATAAGGATGCAACACTTCA 391252
||| | ||||| |||| || ||
Sbjct 84002 ATTCAGAAGGAGTCAACTCTGCA 83980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975694883394332
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |