Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20simmondsii_20[genbank_20GCA_5F001563135.1_202016- 02-17] 929 sequences; 50,474,234 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq134 91.5 1e-12 >seq134 Length=182282 Score = 91.5 bits (100), Expect = 1e-12 Identities = 105/140 (75%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 668849 TTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCT 668908 ||||| || || || |||||| || | || |||||||||||||| |||||||| | || Sbjct 92691 TTAAG-GGCAAGGAGGGTCGTCTTCGTGGCAATTTGATGGGAAAGCGTGTCGACTTTTCG 92749 Query 668909 GCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTT 668968 |||||||| || ||||| |||| |||| | |||| | || ||||||||||||| Sbjct 92750 GCACGTACTGTCATTACCGGTGATGCCAACTTGTCTCTTGACGAGGTTGGTGTTCCTCGC 92809 Query 668969 ATTATTGCTAAAAATCTTAC 668988 | ||| || | || ||| || Sbjct 92810 AGTATCGCAAGAACTCTCAC 92829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780776299959874