Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20simmondsii_20[genbank_20GCA_5F001563135.1_202016-
02-17] 929 sequences; 50,474,234 total letters
Query= NC_023423.1
Length=610033
Score E
Sequences producing significant alignments: (Bits) Value
seq673 87.8 7e-12
>seq673
Length=46916
Score = 87.8 bits (96), Expect = 7e-12
Identities = 119/163 (73%), Gaps = 5/163 (3%)
Strand=Plus/Minus
Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743
||| ||||| | ||| || ||||||||||| ||||| || |||| ||||||| ||||||
Sbjct 30453 CTCGATCAAGTGGGCAATGGTCATACGAGACGGAATTGCGTGAGGATTGATGATAATGTC 30394
Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTT-CAGGTACAATCAAACCAA 309802
|| | || || | | | || ||||||||||||| | | || | | | |||||
Sbjct 30393 CGGCGTGATGCCCTCG---CCGGTAAAGGGCATATCTTCTTGCCGATA-AGTGACACCAA 30338
Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845
| || ||||| || |||| | || |||||||| ||||||||
Sbjct 30337 TGGTACCCTTCTGGCCGTGACGTGAGGCAAACTTATCACCAAT 30295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1951951166014712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |