Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20simmondsii_20[genbank_20GCA_5F001563135.1_202016-
02-17] 929 sequences; 50,474,234 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq356 84.2 1e-11
>seq356
Length=254992
Score = 84.2 bits (92), Expect = 1e-11
Identities = 158/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | || || | || | ||| ||||| ||| || || ||||||||||| ||
Sbjct 83955 ACCACCACGCAGGCGCAGGACGAGATGCAGAGTTGACTCCTTCTGAATGTTGTAATCCGA 84014
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| | || || | || |||||||| || ||||| |||||||| || | ||
Sbjct 84015 CAGGGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGG 84074
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||| || || || || ||| | | || | ||| | |||||| ||||| |
Sbjct 84075 AATACCCTCCTTATCTTGGATCTTC-GACTTGACGTTGTCAATGGTGTCTGAAGATTCAA 84133
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||| ||||| || || || | || || || || |||||||||
Sbjct 84134 CCTCGAGCGTAATCGTCTTGCCGGTAAGGGTCTTGACGAAAATCTGCATA 84183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328700278351680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |