Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20simmondsii_20[genbank_20GCA_5F001563135.1_202016-
02-17] 929 sequences; 50,474,234 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq863 89.7 4e-13
>seq863
Length=517823
Score = 89.7 bits (98), Expect = 4e-13
Identities = 114/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 39128 CGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTT 39187
|||| || ||||| || || || || || |||||||||||||||| ||| | || ||| |
Sbjct 7415 CGTCCTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCGGGGGGGATGCCCTCCT 7356
Query 39188 TGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGA 39247
||||| ||| || |||| | | | || ||| ||||||||| || | ||||
Sbjct 7355 TGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGA 7296
Query 39248 TACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
|| | || |||||||| || || || ||||| |||||
Sbjct 7295 TAGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCAT 7259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429540736604177
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |