Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20simmondsii_20[genbank_20GCA_5F001563135.1_202016-
02-17] 929 sequences; 50,474,234 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq356 86.0 4e-12
>seq356
Length=254992
Score = 86.0 bits (94), Expect = 4e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || ||||| || || || ||||| || ||||| ||||| || |
Sbjct 84182 ATGCAGATTTTCGTCAAGACCCTTACCGGCAAGACGATTACGCTCGAGGTTGAATCTTCA 84123
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || || || || || || ||| | || || || ||
Sbjct 84122 GACACCATTGACAACGTCAAGTCGAAGATCCAAGATAAGGAGGGTATTCCTCCCGACCAG 84063
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| || || || ||||| || || || || || | ||||| | |||||||||
Sbjct 84062 CAGCGCTTGATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACCCTGTCGGATTACAAC 84003
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||| ||
Sbjct 84002 ATTCAGAAGGAGTCAAC 83986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338005772991932
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |