Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F000696135.1_202014-
05-27] 1,625 sequences; 46,755,813 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq831 156 5e-33
>seq831
Length=133518
Score = 156 bits (172), Expect = 5e-33
Identities = 411/630 (65%), Gaps = 48/630 (8%)
Strand=Plus/Plus
Query 145680 CTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTC 145739
||| |||| || || |||| | |||||||| || || |||| |||||| | | |
Sbjct 80859 CTTGAGGGCATCGACATGGTCGGCATAGACGTGTGCATCGCCCATGACGTGTGTCAGGCT 80918
Query 145740 CCCGGGCTCGAGGCC-CGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTA 145798
|| || | ||| | | || | | || | ||| | |||||||| | |||||| || |
Sbjct 80919 GCCAGGGACAAGGTCGCATGCGC-GAGCAATCATATGCGTCAGCAGCGCGTAGCTCGCGA 80977
Query 145799 TGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCT 145858
||||||| ||||| || || |||||||| | || ||||| |||||||||||| || |
Sbjct 80978 TGTTGAAAGGCACTCCGAGGCCCATGTCACAGGACCGCTGATACAGCTGGCAGTGCAGGT 81037
Query 145859 --CCC--------------------------------CGCCCGCC--------ACGTAGA 145876
||| ||||||| |||||||
Sbjct 81038 GGCCCTTGGGCTTCTCCGCGTCGACGGATGCGTTGCGCGCCCGCGGGTAAGAGACGTAGA 81097
Query 145877 ACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGG 145936
||||| | | |||||| || ||||||||||| | |||||||||||||| |
Sbjct 81098 ACTGGGCAAACATGTGGCATGGTGGCAGGGCCATCTTCTTTAAATCCGCCGGGTTCCACG 81157
Query 145937 CGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGA 145996
|| |||||| || | | | | |||||| |||||| || || | || |
Sbjct 81158 CGCTGAGGAGGATGCGGCGGTCATACGGGTTCGTCTTGAGCTTGTGGATAACCTCGGCAA 81217
Query 145997 GCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGT 146056
||||||| ||||| || ||| || || ||||||| ||| |||||| |||| || ||||
Sbjct 81218 GCTGGTCGACGCCTTGGCCCGTATAGTCCGTCTTGGCGTCGACGTACTCGGCGCCAAAGT 81277
Query 146057 GCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGG 146116
| | ||| |||||||| |||||||| || ||||| ||| || | || || |||
Sbjct 81278 GTCGCCATTGGAACCCATAGACGGGGCCGAGGTCGCCGACTTCTCGATGAGAGAGGCCGA 81337
Query 146117 CCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGA 146174
| | ||||||| || || || |||||| ||||||| ||||||||||| |||||| |
Sbjct 81338 CGCTATCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAAATCTTGACGCCCGCCTCGCTCA 81397
Query 146175 GAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCT 146234
| | || ||| ||| ||| || |||||| |||||||| | | ||| | |
Sbjct 81398 GCG-GCA-GAGAGGATGTGTTGCCCTCGACGAACCACAGCAGCTCGGCAATGACGGCACG 81455
Query 146235 CCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264
|||||| | ||| || || || |||||
Sbjct 81456 AAGGAAGACGCGCTTCGTAGTGAGGAGGGG 81485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590064814065000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |