Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F000696135.1_202014- 05-27] 1,625 sequences; 46,755,813 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq831 96.9 3e-15 >seq831 Length=133518 Score = 96.9 bits (106), Expect = 3e-15 Identities = 127/172 (74%), Gaps = 8/172 (5%) Strand=Plus/Plus Query 20925 AGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAG--GTGTGCACAAAGTCTC 20982 |||| ||| || |||| | || ||||| || || |||| | ||||| || || Sbjct 80863 AGGGCATCGACATGGTCGGCATAGACGTGTGCATCGCCCATGACGTGTGTC---AGGCTG 80919 Query 20983 CCGGGGTCAGGCCCG--TGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGAT 21040 || ||| || | || || || |||| |||| || |||||| || |||||||| ||||| Sbjct 80920 CCAGGGACAAGGTCGCATG-CGCGAGCAATCATATGCGTCAGCAGCGCGTAGCTCGCGAT 80978 Query 21041 GTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAG 21092 ||| || || || |||||||||||||| ||||| ||| |||||||||||| Sbjct 80979 GTTGAAAGGCACTCCGAGGCCCATGTCACAGGACCGCTGATACAGCTGGCAG 81030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427767528030000