Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F000696135.1_202014- 05-27] 1,625 sequences; 46,755,813 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq1539 95.1 1e-14 >seq1539 Length=122776 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041 |||| || || || || || |||||||||||||||| |||| ||| || | ||| Sbjct 51252 TGAAGCGTTGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCGTCCTCCAATTGC 51193 Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101 || |||||| | || ||||| |||||||| || || ||||| || ||||| || || Sbjct 51192 TTTCCAGCAAAAATGAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCTTGGATCTTC 51133 Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161 || | | || | |||||||| | || || || | || | ||||| || ||| Sbjct 51132 GACTTAACATTGTCAATCGTGTCCGAAGACTCAACCTCCAACGTAATTGTCTTTCCAGTC 51073 Query 143162 AATGTTTTTACGAATATTTGCATAGCT 143188 || || || ||||| ||||||||| || Sbjct 51072 AACGTCTTGACGAAGATTTGCATACCT 51046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507004101270000