Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Colletotrichum_20sublineola_20[genbank_20GCA_5F000696135.1_202014-
05-27] 1,625 sequences; 46,755,813 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq1539 95.1 1e-14
>seq1539
Length=122776
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 142982 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 143041
|||| || || || || || |||||||||||||||| |||| ||| || | |||
Sbjct 51252 TGAAGCGTTGACTCCTTCTGGATGTTGTAATCGCTCAGGGTGCGACCGTCCTCCAATTGC 51193
Query 143042 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 143101
|| |||||| | || ||||| |||||||| || || ||||| || ||||| || ||
Sbjct 51192 TTTCCAGCAAAAATGAGACGCTGCTGATCAGGGGGGATGCCCTCCTTGTCTTGGATCTTC 51133
Query 143102 TGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 143161
|| | | || | |||||||| | || || || | || | ||||| || |||
Sbjct 51132 GACTTAACATTGTCAATCGTGTCCGAAGACTCAACCTCCAACGTAATTGTCTTTCCAGTC 51073
Query 143162 AATGTTTTTACGAATATTTGCATAGCT 143188
|| || || ||||| ||||||||| ||
Sbjct 51072 AACGTCTTGACGAAGATTTGCATACCT 51046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507004101270000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |